Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0112 ATGGGGAAGAAGACGAAGAAGCCTGGCAAAGGCAAAGAAAAAACAGAGCGAAAAACCGCCAAAGCCGAAGAGAAGCGAGCTCGCAGAGACTCCAAGAAGCTCTCTCCCGAAGACGACATCGACGCCATTTTACTAAGTATTCAAAAGGAAGAGGCAAAGAAGAAGGAAGTCCACGTTGAAGACAACGTCCCCGCACCGTCACCTCGCTCCAACTGTACGCTCACAGTAAATCCCTTGAAAGAGACAGAGTTGGTTCTCTACGGTGGTGAATTCTACAATGGCAACAAGACTTTTGTGTATGGTGATCTTTACCGGTATGATGTGGAGAAGCTGGAGTGGAAATTGGTTTCGAGTCCGAATAGCCCGCCTCCACGCAGTGCTCACCAGGCAGTTGCTTGGAAGAACTATATTTATATTTTTGGTGGTGAATTTACGTCTCCGAATCAAGAGCGGTTCCATCACTACAAGGATTTTTGGATGTTCGACCTGAAAACAAATCAGTGGGAGCAGCTTAATTTAAAGGGATGCCCGAGTCCACGGTCAGGACACCGAATGATATTATACAAGCACAAGATTATTCTTTTTGGTGGCTTCTATGATACACTTAGAGAAGTGAGGTATTACAACGATCTATTTGTATTTGACCTTGATCAATTTAAGTGGCAAGAAATAAAGCCTAAGCCTGGAGCAATGTGGCCTTCTGGTCGTAGTGGCTTTCAATTATTTGTTTACCAAGATGATATATTTCTGTATGGTGGCTATTCGAAAGAAGTTTCTTCTGATAAGAATGGATCTGAAAAAGGAATAGTTCATTCAGACATGTGGTCCCTTGATCCTAAGACTTGGGAATGGAACAAGGTTAAGAAAAGTGGAATGCCTCCTGGGCCTCGTGCTGGGTTTTCCATGTGTGTTCATAAGAGGAGGGCTCTTCTGTTTGGTGGTGTTGTGGATATGGAAGTAGAAGGTGATGTGATGATGAGCTTGTTCATGAATGAGCTTTATGGCTTCCAGTTAGATACCAATCGCTGGTATCCTATAGAGTTGAGAAAGGAGAAGTCAACAAAAGATAAGTTAAAAAAGAATGAACAAAAGTGTATTGGTGATGTTGATAATAAGACAGAAGAAACTGAGGATTTAGAGTATGAAGAAGGCGAGATTGATGATATATCTCAAAATATTGCTTCAACCGTGACTATTGCTGATAGTGAAACACTAGCCAAATCTGAAGGAAAGTCTAAGGAATCCCGTGCTAAGACTGATGTTCAGAGTTCTTCCTTGCCTGAGGTAGTGAAGCCTTGTGGACGTATTAACTCCTGCATGGCAGTTGGAAAAGATACATTATATATATATGGTGGCATGATGGAGATTAAAGATCAAGAAATTACTCTTGATGACTTGTACTGTTTAAACCTCAGCAAACTTGATGAATGGAAGTGCATAATACCGGCATCAGAATCTGAATGGGTGGAAGTCTCGGAGGAGGATGATGATGAAGAAGATGAGGAAGAGGATGGTGAAGATGAATCTGATGGGGATAGCGGAAGCGATGAGAATGAAGATGACGAAGAAGAGGAGGAAGAGAATCAGAATGCATCAGTTCAGATGGGAGATGCTGTTGCTTTAATCAAGGGAGTCGGAAAGAATCTGCGTAGGAAAGAGAGGAGGTCACGGATAGAGCAGATCAGAGCTAGCCTTGGCTTGTCAGATTCACAGAGAACACCATTGCCAGGAGAATCGTTGAGGGACTTCTACAGACGTACAAATATGTATTGGCAAATGGCAGCGCATGAACATACTCAGCACACTGGGAAGGAACTTCGCAAGGACGGTTTTGATCTTGCTGAAGCTCGATACAGAGAGCTAAAACCAATTCTTGATGAGCTGGCTCTATTAGAAGCTGAGCAGAAAGCTGAAGAGGCTGAAGGGCCTGAAACAAGTAGTAATGCAAAGAAGAGAGGCAAGAAGAAAACCAGAAATTGA 1980 0.4293 MGKKTKKPGKGKEKTERKTAKAEEKRARRDSKKLSPEDDIDAILLSIQKEEAKKKEVHVEDNVPAPSPRSNCTLTVNPLKETELVLYGGEFYNGNKTFVYGDLYRYDVEKLEWKLVSSPNSPPPRSAHQAVAWKNYIYIFGGEFTSPNQERFHHYKDFWMFDLKTNQWEQLNLKGCPSPRSGHRMILYKHKIILFGGFYDTLREVRYYNDLFVFDLDQFKWQEIKPKPGAMWPSGRSGFQLFVYQDDIFLYGGYSKEVSSDKNGSEKGIVHSDMWSLDPKTWEWNKVKKSGMPPGPRAGFSMCVHKRRALLFGGVVDMEVEGDVMMSLFMNELYGFQLDTNRWYPIELRKEKSTKDKLKKNEQKCIGDVDNKTEETEDLEYEEGEIDDISQNIASTVTIADSETLAKSEGKSKESRAKTDVQSSSLPEVVKPCGRINSCMAVGKDTLYIYGGMMEIKDQEITLDDLYCLNLSKLDEWKCIIPASESEWVEVSEEDDDEEDEEEDGEDESDGDSGSDENEDDEEEEEENQNASVQMGDAVALIKGVGKNLRRKERRSRIEQIRASLGLSDSQRTPLPGESLRDFYRRTNMYWQMAAHEHTQHTGKELRKDGFDLAEARYRELKPILDELALLEAEQKAEEAEGPETSSNAKKRGKKKTRN* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0112 659 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 651 - -
Amo13g0112 659 SUPERFAMILY Kelch motif 82 479 IPR015915 GO:0005515
Amo13g0112 659 MobiDBLite consensus disorder prediction 485 537 - -
Amo13g0112 659 MobiDBLite consensus disorder prediction 488 530 - -
Amo13g0112 659 Pfam Galactose oxidase, central domain 439 482 - -
Amo13g0112 659 Pfam Galactose oxidase, central domain 186 228 - -
Amo13g0112 659 Pfam Galactose oxidase, central domain 68 122 - -
Amo13g0112 659 MobiDBLite consensus disorder prediction 12 36 - -
Amo13g0112 659 MobiDBLite consensus disorder prediction 404 424 - -
Amo13g0112 659 Gene3D - 43 377 IPR015915 GO:0005515
Amo13g0112 659 MobiDBLite consensus disorder prediction 635 650 - -
Amo13g0112 659 MobiDBLite consensus disorder prediction 1 36 - -
Amo13g0112 659 Pfam Domain of unknown function (DUF4110) 566 650 IPR025183 -
Amo13g0112 659 MobiDBLite consensus disorder prediction 635 659 - -
Amo13g0112 659 Pfam Galactose oxidase, central domain 135 185 - -
Amo13g0112 659 Pfam Galactose oxidase, central domain 246 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0112 Amo-Chr13 1639728 1649378 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0112 91 314 Acyl Lipid Metabolism Gene Families AT3G05420 28.151 1.84e-17 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0112 - - gmx:100818228 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0112 13 1639728 1649378 Amo13g0112 13 1639728 1649378 ECH