Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0103 ATGGCAGCTCACAGCAACCGCCGCGTGACGCTGCTATGCCGCCCAACCAAACACCTCATCTCAGGATCCGACCCGAAAACATACTGGCTCGTCGGATCCCCCTTCTTACCGCCGCTCACCGTCGCATCCCTCCTCCTCCGCCTCTCCTCCGATGATCTCCACAAAGAATCAGAGGAGCTTCGGACATTGATTCCTAAAGGCTTTGAAGTAATTGGAGCGCTTGCTTACGGAGCCGGCGCCGACGCTCAAGCGGCAGTTCATGCTGCTCGCAGACTGAGGAAGCTTCTATACGGTGAAGAGGAAGGGGATAATCGACCGGTGATCGGAGCAGTCGCCGCCGGTTCCGGCGAGCTGAAATTTTTCGTGTCGGAGAGTGGAAAATCGAATAGCCTCGAAGAGGTTGATTCAGTTGTTGAAGAAGAACATTCGGAGAAGTATGTGTGGGAGAATGGTTGCTTGGTTCGTTGTGAGCTTCCGATCAAGTTGCCAGTATATTATCCTCTCAAGAATACGAGTGATGTTGAGAAAGCATTTGTGAGGGCAATTGAAGCTGTTGTTGCTAAGTTAAGAGATTCACAGGCTGTGTACATGTTAGAGGCATTAAACAAGACCTCTATGGATCTACCTGCACCCATTGTAATTCGTGGTGGCCATTTAGACTTTCGAGCAGACCTCTCCAACATCTGGCATTTGGCTGAGGGTGGTGATAATGTTGATGTGAATTCTCTACCGTGTTCATACTTTTCTGTCATCAGTAAAGGATCGTCAGCATTTTCTGTGGAGAATGCAGATACCATCCAAGTTAGTGTTCTCTTTAACAGCTTAGGGCCATCATCAGCGTCTGCTGTGCCTGTTGCAGAGTACATTCCAGCCCAGGATGAAGCCAGGCTCCTTGTTGTGGATATTAAACTAGATGTACTCTGCTATGCTTCTAAGAACCTCCCCTTGAGGCATGCAGTTTCAAGATTAATCATCCCTGGTTTAGCTGATCAGTTAAATGCATTGCAGAATTCAATGTTGCCTAACCTTTTGGGACAACACCCTCAGATAAAACCTTATCACTTCAGTCCTCCTCATGTTCTGCATCCAATTACTGTTTTCTATGAACTGAGTTTCGGGGAGACAGAAATGAAGCAAGTTGAAGTTAGGAGATCCTTACACACAAGGTTGGGATTACCTTTTGATCGACCCCTTCTGAGAATCGCTAACGCCTTGGATTTTTCAAAATTGAAAATTGGTGGTCTTGGCTCTCAACAAAAGGGTTCAACTTTACTCAGGGATGTACACATTGGGATTCCAAACAGTGGGGTTTCTGGGGGAAGTGTTTCTCTTGTTCAAGGTTCCTATGAATACTTTCATTATCTTCAGGATGGTTTTAATGATTCGGGATGGGGTTGTGCTTATCGCTCTCTCCAGACTATCATTTCATGGTTCAGACTCCAAAACTACTCATCTATAGAGGTTCCTTCTCATAGAGAAATACAGCAGTCACTTGTGGAGATTGGTGATAAAGATCCTTCTTTCGTTGGGACACGTGATTGGATTGGTGCCATTGAGTTGAGCTTTGTTTTGGACAAACTTCTTGGCGTCACATGCAAAGTGATCAACGTTAGATCCGGAGCTGAGCTTCCAGAAAAATGTCGAGAGCTAGCATTGCACTTTGAGACCCAAGGAACACCTATTATGATTGGTGGTGGTGTACTTGCATATACACTCTTGGGAGTGGATTACAATGAAGCAAGTGGAGATTGTGCGTTTTTAATACTCGATCCACACTATACAGGCACAGATGATCTGAAAAAGATCGTTAATGGTGGATGGTGTGGGTGGAAGAAAGCTGTCGATAGCAAAGGAAAGAATTTCTTCTTGCATGATAAGTTTTATAATCTCCTTCTACCACAGAGGCCCAACATGGTTTGA 1920 0.4552 MAAHSNRRVTLLCRPTKHLISGSDPKTYWLVGSPFLPPLTVASLLLRLSSDDLHKESEELRTLIPKGFEVIGALAYGAGADAQAAVHAARRLRKLLYGEEEGDNRPVIGAVAAGSGELKFFVSESGKSNSLEEVDSVVEEEHSEKYVWENGCLVRCELPIKLPVYYPLKNTSDVEKAFVRAIEAVVAKLRDSQAVYMLEALNKTSMDLPAPIVIRGGHLDFRADLSNIWHLAEGGDNVDVNSLPCSYFSVISKGSSAFSVENADTIQVSVLFNSLGPSSASAVPVAEYIPAQDEARLLVVDIKLDVLCYASKNLPLRHAVSRLIIPGLADQLNALQNSMLPNLLGQHPQIKPYHFSPPHVLHPITVFYELSFGETEMKQVEVRRSLHTRLGLPFDRPLLRIANALDFSKLKIGGLGSQQKGSTLLRDVHIGIPNSGVSGGSVSLVQGSYEYFHYLQDGFNDSGWGCAYRSLQTIISWFRLQNYSSIEVPSHREIQQSLVEIGDKDPSFVGTRDWIGAIELSFVLDKLLGVTCKVINVRSGAELPEKCRELALHFETQGTPIMIGGGVLAYTLLGVDYNEASGDCAFLILDPHYTGTDDLKKIVNGGWCGWKKAVDSKGKNFFLHDKFYNLLLPQRPNMV* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0103 639 SUPERFAMILY Cysteine proteinases 459 596 IPR038765 -
Amo13g0103 639 Pfam Peptidase family C78 442 631 IPR012462 -
Amo13g0103 639 Gene3D - 422 639 - -
Amo13g0103 639 PANTHER - 115 638 - -
Amo13g0103 639 ProSiteProfiles Rhodanese domain profile. 601 619 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0103 Amo-Chr13 1531560 1536461 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0103 K01376 - gmx:100819651 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0103 13 1531560 1536461 Amo13g0103 13 1531560 1536461 ECH