Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0085 ATGCCACAATTTGATGCTGTGAACAAGCTTGTGAAGGCTTCATTGGATGTTACAATGTGCATTGTTAAGTTTAAGGAGCTTCCAACTCAATATATTTCTGAAGACTCTCCTCCTATGTCTCTTGCAACTGCTTATATTCCAATTGCTGCTTATTGGGTTATTAGAAGCATTGTTGCTGTTCCTACTCAGATTTTCTGGTCGATGTCATCAGCCACAGAGGCATGGGAATTATCTAGCCTTGCTCACAAAATGGCTAGTATATATGAGCACCTCAATAATCAATTGGATCAATGCTATCGAGCCATAGAGGAAAGGATGCAAATAGAGGCCTTCCACAATCTGGTCCGTTTATTTGAGACAGTCCACATAGACAACATGAAAATCCTCAGAGCATTGATATATGCCAAGGATGATTTTCCTCCACTCATTGATGGAACTACCAAAACAAAGACTAGTCTTGAAATCCTAAGGAGGAAGCATGTGCTACTTCTAATATCAGATCTTGACCTATCACAAGAAGAGATAATGGTTCTTGACAACTTATACAAAGATGCAARAGCAAGAGGTGAAGGACACTATGAAATGGTGTGGATCCCAGTTGTGGAGAAATCTTCATGGAATGAAGCAGCMAATCAAAAGTTTGAGTACTTGCAATCAATGATGGCATGGTATAGTGTTAGAGACCCATTCATAATTGAGCCWTCAGTTATAAARTACATAAAAGAAGTTTGGAACTTYACAAAGAAAGCCATTGTTGTTGCACTTGATCCACAAGGGAGGTTGTCTTCACCAAATGCAMTTCATATGATTTGGATTTGGGGTAACTTGGCTTTCCCTTTCACAAGAGAGAAAGAAGAGTCTATGTGGAAGCAAGAGATTTGGAGTCTTGAGCTTCTTGTTGATGGCATTGACCCTAGCAAATTCATATGCCTGTATGGAGGTGAAGACCTTGAATGGATTTCAAAATTCACGACGGCCGCACTTAGCGTTGCGAAAGCCGGCGGATTCGAGCTAGAGATGGTTTATGTGGGGAAGAGCAATGCCAAGGAGAGGATGCAGAAAATGATCAACACATTTGCCACAAGGAAGTTCAGCTACTATTGGCCTAATGTGACTTCAATTTGGTTCTTTTGGGCAAGGTTGGAGAGCATGCTTTACTCAAAGTTGCAGCATGGAAGAACAGTGGAGAATGATGAAATCATGAGTGAGGTGATGACTGTGCTTAGCTTTGATGGTAGCGATCAAGGTTGGGCTATATTTTGTAGAGGTGCATCAGAAATGGCTAGAGCCAAAGGTGACACTGCCCTAACAAGCTTGTTGGAATTTGATAAATGGAAGGAGAACATTGATAAGCTTGGTTTGGTCCAAGCTCTCAAGGATTATCTTGATCAGCTTCACACCCCTCACCACTGCAACCGCCTCATACTCCCCGGTAGCACCGGCGGCATACCACAGAAGGTCGTTTGCGCCGAATGCGGCCGCCAAATGGAAAAATACTTTATGTATCGTTGCTGCGTCGAGTAG 1524 0.4219 MPQFDAVNKLVKASLDVTMCIVKFKELPTQYISEDSPPMSLATAYIPIAAYWVIRSIVAVPTQIFWSMSSATEAWELSSLAHKMASIYEHLNNQLDQCYRAIEERMQIEAFHNLVRLFETVHIDNMKILRALIYAKDDFPPLIDGTTKTKTSLEILRRKHVLLLISDLDLSQEEIMVLDNLYKDAXARGEGHYEMVWIPVVEKSSWNEAANQKFEYLQSMMAWYSVRDPFIIEPSVIKYIKEVWNFTKKAIVVALDPQGRLSSPNAXHMIWIWGNLAFPFTREKEESMWKQEIWSLELLVDGIDPSKFICLYGGEDLEWISKFTTAALSVAKAGGFELEMVYVGKSNAKERMQKMINTFATRKFSYYWPNVTSIWFFWARLESMLYSKLQHGRTVENDEIMSEVMTVLSFDGSDQGWAIFCRGASEMARAKGDTALTSLLEFDKWKENIDKLGLVQALKDYLDQLHTPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0085 507 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 2 506 IPR039299 GO:0010088
Amo13g0085 507 Pfam Sieve element occlusion C-terminus 284 505 IPR027944 -
Amo13g0085 507 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 2 506 - -
Amo13g0085 507 Pfam Sieve element occlusion N-terminus 2 122 IPR027942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0085 Amo-Chr13 1136337 1147015 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0085 - - gmx:100811452 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0085 13 1136337 1147015 Amo13g0085 13 1136337 1147015 ECH