Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0041 ATGGGATCTCCTAGTGGACTAGCCACAGTGCAAGGGAGACAACCTCTATTTTCTTTTGGATTGATTTCCGATGTCCAGTATGCTGACATCCCCGATGGTCGCTCGTTCCATGGGGTTCCGCGGTATTATAGGCATAGTATTCTTGTTTTGCAGAGAGCAGTTAAAGAATGGAATGCTCTTCAGAAGCATAAGTTTGTGATGAACTTTGGAGATATAGTTGATGGGAATTGTCCAAAAGATCAGTCTCTAAATGCTGTAAAGAAGGTTGTCGATGAATTTGCGAGGTTCAGGGGACCCGTATATCATATGATTGGCAATCACTGCCTGTACAATCTTCCTCGCAGCAAGTTACTTCCAATATTGGAGATCCAAAGTATTGATGATGGATGTGCTTACTATGATTTCTCGCCAGTYCCAGAATATAGATTTGTAGTTCTGGATGCCTTTGACATCAGTGCCGTTGGTTGGCCTAAAGACCATCCAAGAACATTGGAGGCCTTGAAGTTTCTGAGGGAGAGGAATCCGAATAAAGATAAGAACAGTCCAAGAGGGTTGGTGGGCCTTGAAAGAAGGTTCCTTATGTTCAATGGAGGCATTGGAAAGGAACAAATGGAATGGTTGGACAGGGTTCTTCAGGATGCAATGAAATTGAAACAGAAGGTGGTGATATGTTGCCATGTGCCTCTGGATCCTGGTGCGACGGAGTATGAGGCATTGTTGTGGAATTACGATGAAGTGATGGATGTGATACACAGGTACAATTGTGTGAAGGTTTGTCTTGGAGGACATAATCACAGAGATGGGTATTCCATTGACTCTCACGGGGTCCATCATCGAGTTTTTGAAGCTGCTCTAGAATGTCCTCCTGGCAGGAACGCATATGGAAATGTCGATGTCTATGATGACCAAATATCACTTGTTGGAATCGACAGAATTGAAAGTATAGACATGCAATTTTAA 960 0.4323 MGSPSGLATVQGRQPLFSFGLISDVQYADIPDGRSFHGVPRYYRHSILVLQRAVKEWNALQKHKFVMNFGDIVDGNCPKDQSLNAVKKVVDEFARFRGPVYHMIGNHCLYNLPRSKLLPILEIQSIDDGCAYYDFSPVPEYRFVVLDAFDISAVGWPKDHPRTLEALKFLRERNPNKDKNSPRGLVGLERRFLMFNGGIGKEQMEWLDRVLQDAMKLKQKVVICCHVPLDPGATEYEALLWNYDEVMDVIHRYNCVKVCLGGHNHRDGYSIDSHGVHHRVFEAALECPPGRNAYGNVDVYDDQISLVGIDRIESIDMQF* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0041 319 PANTHER - 3 319 - -
Amo13g0041 319 SUPERFAMILY Metallo-dependent phosphatases 15 318 IPR029052 -
Amo13g0041 319 PANTHER MANGANESE-DEPENDENT ADP-RIBOSE/CDP-ALCOHOL DIPHOSPHATASE 3 319 - -
Amo13g0041 319 CDD MPP_Nbla03831 17 306 IPR041869 -
Amo13g0041 319 Pfam Calcineurin-like phosphoesterase 18 267 IPR004843 GO:0016787
Amo13g0041 319 Gene3D - 12 312 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0041 Amo-Chr13 736486 738567 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0041 K01517 - gmx:100780293 538.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0041 13 736486 738567 Amo13g0041 13 736486 738567 ECH