Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0040 ATGCAAGATGCAATTAGTATCCCCGCGTGCTTTTCTCCGTCTCCTTCTTTACAAAGTACTAGTAACGGACATGAAACTACTCTGACTCGATCAAGTCAGAGCATTTTCATGTCCGTATATAGAACCAAAGTTGCTGATCAGTGTCGACTGATCAGCATCACATGGTGCAAAAACTTGATGCTTCACGGCTTGTCCGTGTCCGTGTCAGGATCCGAGGGACAAACTGAGTATAGCTGCAAGGTCGAGTTGAAACCATGGTACTTTTGGAGAAAACAAGGATCGAAGCGCTTGGTCATTGAAGACACAAGTAGTAATAAAGATATTGAGATATTTTGGGATCTTAAGAATGCAAAGTTCCATGGTGAAACGGAACCGAGTTCGGATTACTATGTTGCTGTGGTTTGTGATCAAGAGGTTGTTCTTCTTCTTGGTGATATGAAGAAAGAAGCTTATAGAAGAACAAGGTGCAGACCTTCGCTAATTGATCCCATTTTAGTTTCAAAGAAGGAGCATATATTTGGGAAGAAGAAGTTCTCAACTAGAGCAAAGTTTCATGAAAAGGGTAGATGCCATGAGATCTCAATTGAATGCAAGAACAATAACATCAAAGGAAGCAGCAACAATGGTGGAGGAGATAATAATGGAGTTGTTCAGCATAATCATCATCATCATCAACCAGAATTGGAGATAAGATTTGATGGGCACTTAGTGATTCATGTGAAGCACTTGCAATGGAAATTCAGAGGGAATGAACGAGTTCATATGAACAAGATGAGAGTGGAAGTATATTGGGATGTTCATGATTGGCTCTTCAATCATGGTTTGAAGCATGCATTGTTCATATTCAAGCCAGTTTTGTTATCATCATCAAAATCATCSTCACTTTCATCGTCTTCGCCGTCGCCGTCGCCGTTATCGTCTTCGTCTCCGTCTTCTACTCCGTTATCAAGTAACACGGGTAGTTCTGCTGGATCATCATCAATGTTGGAGGGATTGAATTGTGTTAGTAGTAATGTTTCTTCTTCTTCTTCTTCTTCGGAGTTTTGCTTGTTTATCTATGCTTGGAAAGTTGAATAA 1077 0.403 MQDAISIPACFSPSPSLQSTSNGHETTLTRSSQSIFMSVYRTKVADQCRLISITWCKNLMLHGLSVSVSGSEGQTEYSCKVELKPWYFWRKQGSKRLVIEDTSSNKDIEIFWDLKNAKFHGETEPSSDYYVAVVCDQEVVLLLGDMKKEAYRRTRCRPSLIDPILVSKKEHIFGKKKFSTRAKFHEKGRCHEISIECKNNNIKGSSNNGGGDNNGVVQHNHHHHQPELEIRFDGHLVIHVKHLQWKFRGNERVHMNKMRVEVYWDVHDWLFNHGLKHALFIFKPVLLSSSKSSSLSSSSPSPSPLSSSSPSSTPLSSNTGSSAGSSSMLEGLNCVSSNVSSSSSSSEFCLFIYAWKVE* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0040 358 MobiDBLite consensus disorder prediction 203 224 - -
Amo13g0040 358 PANTHER EXPRESSED PROTEIN 1 358 IPR008586 -
Amo13g0040 358 MobiDBLite consensus disorder prediction 293 327 - -
Amo13g0040 358 PANTHER OS01G0909400 PROTEIN 1 358 - -
Amo13g0040 358 Pfam Plant protein of unknown function (DUF868) 32 356 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0040 Amo-Chr13 724412 726640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0040 7 296 EF-hand Containing Proteins AT5G28150 39.249 2.23e-65 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0040 - - adu:107478911 607.446
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0040 13 724412 726640 Amo13g0040 13 724412 726640 ECH