Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0024 ATGGCCCCAGCTTCGCAAAAGGCGACGCCACTATCACTCTCACTCTCACCACCGCCATGCTGTCCTCCCTCCGCCGCCGCCTCCTCCGCCGCCGCGCCGGAATGGACTGCGCCGCCACTTCAGGACGATCGCCGCCGCAACAGTAACAACACCACCACCACTAACAAGGTCTCCTTGATTCGCTCAGTGGATTCTCTCCCTGAATCAACTTCCACCAATGCCCCTACTGCCAAAGGAATCACGGCAATGCCAAGGGCACAGTCAAGCCACCCTTTGGACCCTTTATCTGCTGCCGAAATCTCTGTGGCTGTGGCAACTGTGAGGGCTGCTGGAGCCACTCCCGAGGTTAGGGACAGTATGCGCTTCATTGAAGCAGTTTTGAGGGAACCGGATAAACACATTGTTGCACTGGCAGATGCTTATTTCTTTCCACCTTTCCAGCCATCATTACTTCCTAGAACCAAAGGAGGCCCTGTGATTCCTACCAAACTCCCTCCAAGATGTGCTAGACTTGTTGTTTACAATAGGAAATCAAATGAAACGAGTATATGGATCGTTGAATTATCACAAGTACATGCTGTAACTCGAGGTGGTCATCATCGAGGAAAAGTCATTTCTTCACATGTTATTCCTGATGTTCAGCCTCCAATGGATGCTGTGGAATATGCAGAATGTGAGGCTGTTGTTAAAGATTATCCTCCATTTATAGAAGCTATGAAGAAAAGGGGTATTGAAGACATGGAGCTTGTAATGGTTGATCCCTGGTGCACTGGTTATCACAGTGAAGTTGATGCTCCCAGCAGAAGACTTGCCAAACCACTTATATTTTGTCGATCCGAGAGTGACTGCCCTATGGAAAATGGCTATGCTCGCCCAGTTGAGGGAATTCATGTTCTAGTTGATCTGCGAAATATGGTGGTGATAGAGTTTGAAGACCGCAAACTTGTTCCTCTGCCACCTGTTGATCCCTTGAGGAACTATACTCCTGGTGAAACACGAGGTGGCTCTGATAGAAGTGATGTCAAGCCCTTGCAAATTAGTCAACCTGAAGGTCCAAGCTTTCGTGTCAATGGACAATATGTAGAGTGGCAGAAGTGGAATTTCCGTGTTGGATTCACACCCAAAGAGGGCTTGGTTATATATTCTGTTGCTTATGTTGATGGTAGTCGAGGGCGAAGGCCTGTAGCACATAGGCTGAGCTTTGTAGAGATGGTTGTACCCTATGGAGATCCGAACGATCCACACTACAGAAAAAATGCTTTTGATGCTGGGGAAGATGGCTTGGGGAAAAATGCACATTCTCTCAAGAAGGGTTGTGATTGTTTGGGCTACATCAAATACTTTGATGCTCACTTCACAAATTTCACTGGTGGAGTGGAGACAATTGAAAACTGTATATGTTTGCATGAAGAGGATCATGGAATTCTTTGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTTCGAAGGTCTAGAAGGCTTTCAGTATCGTTTATATGCACAGTGGCCAACTATGAGTATGCATTTTTTTGGCATTTTTATCAGGATGGAAAGATTGAAGCCGAAGTTAAGCTTACTGGAATTCTCAGCTTAGGAGCACTGATGCCTGGAGAGCTTCGAAAATATGGAACCATGATTGCTCCAGGTCTATATGCTCCGGTCCATCAACACTTCTTTGTTGCTCGCATGGACATGGCTGTTGATTCTAAACCTGGTGAAGCTTTGAATCAGGTAGTGGAGGTCAACATGAAAGTTGAGGAAGTTGGTGACCATAATGTTCATAATAATGCATTTTTTGCTGAAGAAACGTTGCTCAAATCTGAGCTGGAAGCAATGCGTGATTGTGAGCCTTTGACTGCTCGACATTGGATTGTAAGGAACACAAGAACAGGCAATAGAACTGGACAGTTGACAGGATTCAAGCTAGTACCCGGCACAAACTGCTTACCATTAGGAGGTCCTGAGGCCATGTTTTTAAGAAGAGCTGCCTTCTTGAAGCATAATCTTTGGGTAACAACATACTCACGCGACGAAATGTTTCCTGGAGGAGAATTTCCGAACCAAAATCCGCGCATCGGCGAAGGGCTAGCTACATGGGTTCAGCAGAACAGACCTTTGGAAGAAGCTGACATAGTTCTTTGGTATGTGTTTGGAGTCACACATGTTCCTCGTTTAGAAGATTGGCCTGTTATGCCAGTAGAGCGCATTGGTTTTATGCTCATGCCTCATGGATTCTTCAATTGTTCACCAGCAGTGGATGTGCCTCCAAGTCCCTGTGAATTGGATGCTAAAGATAATGACATCAAGGATAGTAGTGGTGCTACCAAGCCAATTCAGAGTGGCTTAGCTTCAAAGTTGTGA 2364 0.4607 MAPASQKATPLSLSLSPPPCCPPSAAASSAAAPEWTAPPLQDDRRRNSNNTTTTNKVSLIRSVDSLPESTSTNAPTAKGITAMPRAQSSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFIEAVLREPDKHIVALADAYFFPPFQPSLLPRTKGGPVIPTKLPPRCARLVVYNRKSNETSIWIVELSQVHAVTRGGHHRGKVISSHVIPDVQPPMDAVEYAECEAVVKDYPPFIEAMKKRGIEDMELVMVDPWCTGYHSEVDAPSRRLAKPLIFCRSESDCPMENGYARPVEGIHVLVDLRNMVVIEFEDRKLVPLPPVDPLRNYTPGETRGGSDRSDVKPLQISQPEGPSFRVNGQYVEWQKWNFRVGFTPKEGLVIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCICLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALMPGELRKYGTMIAPGLYAPVHQHFFVARMDMAVDSKPGEALNQVVEVNMKVEEVGDHNVHNNAFFAEETLLKSELEAMRDCEPLTARHWIVRNTRTGNRTGQLTGFKLVPGTNCLPLGGPEAMFLRRAAFLKHNLWVTTYSRDEMFPGGEFPNQNPRIGEGLATWVQQNRPLEEADIVLWYVFGVTHVPRLEDWPVMPVERIGFMLMPHGFFNCSPAVDVPPSPCELDAKDNDIKDSSGATKPIQSGLASKL* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0024 787 MobiDBLite consensus disorder prediction 773 787 - -
Amo13g0024 787 SUPERFAMILY Amine oxidase N-terminal region 214 332 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Amo13g0024 787 Pfam Copper amine oxidase, enzyme domain 344 752 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Amo13g0024 787 Gene3D - 74 217 - -
Amo13g0024 787 MobiDBLite consensus disorder prediction 325 348 - -
Amo13g0024 787 MobiDBLite consensus disorder prediction 762 787 - -
Amo13g0024 787 SUPERFAMILY Amine oxidase N-terminal region 88 216 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Amo13g0024 787 MobiDBLite consensus disorder prediction 1 78 - -
Amo13g0024 787 Pfam Copper amine oxidase, N3 domain 215 318 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Amo13g0024 787 PANTHER COPPER AMINE OXIDASE 51 775 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Amo13g0024 787 PANTHER AMINE OXIDASE 51 775 - -
Amo13g0024 787 SUPERFAMILY Amine oxidase catalytic domain 338 757 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Amo13g0024 787 Gene3D - 220 322 - -
Amo13g0024 787 Gene3D Copper amine oxidase, catalytic domain 331 757 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Amo13g0024 787 MobiDBLite consensus disorder prediction 42 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0024 Amo-Chr13 599135 604293 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0024 K00276 - gmx:100798722 1358.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0024 13 599135 604293 Amo13g0024 13 599135 604293 ECH