Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3402 ATGGATGATAATAATGGAGAAGCAAAGAGAATGGAAGAAGGTTTGAATGGCTCTATTGTTATTGATCATGATGAAAAGGACAAAACGGTCATTTCTCATGAGAAAGATCAAGGAACAATGAAACAGAAAACAAAGAGAATCGCAACACTTGATGCATTTAGAGGTTTCACTATCGTGGTGATGATATTGGTTGATGATGCTGGTGGGGCTTATCCAGAAATTGATCACTCACCTTGGAATGGATGCACATTGGCTGATTTTGTTATGCCTTTCTTTCTTTTCATTGTTGGAGTTGCCATAGCTCTTGCTTTCAAGATATTCATTAGAACATTGAAACTTCTCTTCTGGGGTATACTTTTGCAAGGTGGATACTCTCATGCCCCTGATGACCTTTCATATGGGGTTGACATGAAATTTATTAGATGGTGTGGCATTCTTCAGAGAATAGGCCTTGTATTCTGTGTTGTTGCTCTAATAGAGACATTTAGTTCCAAGATTAGACCAACCACCCTAAATCCTGGACATCTATCCATTTTTACTGCCTATAGATGGCAATGGTTTGGAGGATTTGTTGCATTTCTGATTTACATGGTCACAACATTCAGCCTCTATGTTCCAAATTGGAGTTTTGTGGACTATAATGAGGAAAACCCAAAGAGACATACAGTAATATGTGGCATGAGAGGAGACTTAGGAGCAGCATGTAATGCAGTTGGCTATGTGGACAGACAAGTTTGGGGGATTAACCATCTTTACTCTCATCCTGTTTGTGCATGCACATTAAGTTCTCCAAGTGAGGGGCATTTTCGTAAAGATGCTCCAACTTGGTGTCGTGCTCCCTTTGAACCTGAGGGCCTGTTGAGTTCCATATCAGCTATCCTGTCTGGCACCATTGGCGTCCACTATGGTCATAGGCATTCAGAGAGGTTAAAGCAATGGATCTCAATGGGGTTTGTGTTACTAATCCTTGGCATCATCCTTCATTTAACACATGGTAAGCTACTGATACAAATTGATGTTTGGGGATTTAGAACGCCATTCTTGTTCTTGGAATGGATAGGAATGAATGCAATGCTTGTGTTTGTTATGGCTGCTCAGAGCATCTTCCCAGGCTTTGTTAATGGATGGTATTTTAAGGATCAAGATAACACACTAGTAAATTGGATCCAAGAGCATGTGTTTAACAATGTTTGGCACTCAGAGAGATTGGGTACTCTATTATATGTCATCTTTGCTGAAATCACTTTCTGGGGTTTGGTTGCTGGCATCTTCCACAAATTAGGAATATATTGGAAACTCTAG 1302 0.4009 MDDNNGEAKRMEEGLNGSIVIDHDEKDKTVISHEKDQGTMKQKTKRIATLDAFRGFTIVVMILVDDAGGAYPEIDHSPWNGCTLADFVMPFFLFIVGVAIALAFKIFIRTLKLLFWGILLQGGYSHAPDDLSYGVDMKFIRWCGILQRIGLVFCVVALIETFSSKIRPTTLNPGHLSIFTAYRWQWFGGFVAFLIYMVTTFSLYVPNWSFVDYNEENPKRHTVICGMRGDLGAACNAVGYVDRQVWGINHLYSHPVCACTLSSPSEGHFRKDAPTWCRAPFEPEGLLSSISAILSGTIGVHYGHRHSERLKQWISMGFVLLILGIILHLTHGKLLIQIDVWGFRTPFLFLEWIGMNAMLVFVMAAQSIFPGFVNGWYFKDQDNTLVNWIQEHVFNNVWHSERLGTLLYVIFAEITFWGLVAGIFHKLGIYWKL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3402 433 PANTHER LD22376P 4 331 - -
Amo12g3402 433 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE PROTEIN 335 433 - -
Amo12g3402 433 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE PROTEIN 4 331 - -
Amo12g3402 433 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 46 164 IPR012429 -
Amo12g3402 433 PANTHER LD22376P 335 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3402 Amo-Chr12 123185543 123197175 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3402 K10532 - gmx:100809725 659.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3402 12 123185543 123197175 Amo12g3402 12 123185543 123197175 ECH
Amo12g3402 12 123185543 123197175 Amo06g1379 06 35358051 35370244 PCT