Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3170 ATGGGAAGGCTTGCACCATTGTCAGAAGAACCTATCAATGAAGAAGAACAAGATTATTATGTAACCAGCAGCAACAACAAGAACTCATCATCATCATCATTATCAAAGCATAAAGTGTTTCTTCATTCATGGCGTAATTGGAACTGGATCAAGAACCACTTCTCCATTGCATTCAACAAGAAGTCCAACCTCAAGATCCTCCTCAGTGTTCTTGGTTGTCCTCTCTTCCCTCTCCCTGTCCACCCCAAACTACCCCTCAATGAGGTATCATCATCAGCACAATATATTATACAACACTACAGTGCAGCCACAAGGTGCAGGAAATTGGAAGGGACAGTGAAGAATGTGTTCAGTACCGGAAAAGTGGCAATGGTTGTGGTGGATGAACTTGTTAATAATGGTGGCTCAGAAAAAGGGTGCTTTGTAATGTGGCAAATGGTTCCAGATAAATGGCAGATAGAGTTAGTTTTGAGTGGACAAAAGGTTGCTGCTGGTAGCAATGGCAGTGTGGCTTGGCGTCATACTCCATGGCTTGGTACACATGCTGCTAAAGGTGGTGTTCGTCCTCTTCGTCGCACTCTTCAGGGATTAGACCCTTTAGCAATATCCTGTGTATTCAGTGGAGCACAATACATGGGAGAGAAAGAAATGTCAGAGATGGATTGTTTTGTGTTAAAACTTTCAGCAGATCAAAAGGATCTTGCTCAAAGAAGTGACAACACAGCAGAGATGATCAAACATTCCATTTTTGGTTACTTCAGCCAAAGGAGTGGCCTCTTAGTTCATCTTGAGGACTCATATCTAACAAGAATTCAAGCTCCAGGGTCATACCCTACATACTGGGAAACAACAATGTCAACAATCATACTATGA 873 0.4238 MGRLAPLSEEPINEEEQDYYVTSSNNKNSSSSSLSKHKVFLHSWRNWNWIKNHFSIAFNKKSNLKILLSVLGCPLFPLPVHPKLPLNEVSSSAQYIIQHYSAATRCRKLEGTVKNVFSTGKVAMVVVDELVNNGGSEKGCFVMWQMVPDKWQIELVLSGQKVAAGSNGSVAWRHTPWLGTHAAKGGVRPLRRTLQGLDPLAISCVFSGAQYMGEKEMSEMDCFVLKLSADQKDLAQRSDNTAEMIKHSIFGYFSQRSGLLVHLEDSYLTRIQAPGSYPTYWETTMSTIIL* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3170 290 PANTHER GB|AAD30234.1 2 289 - -
Amo12g3170 290 PANTHER LIPASE 2 289 IPR006873 -
Amo12g3170 290 Pfam Protein of unknown function (DUF620) 118 289 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3170 Amo-Chr12 120440111 120446684 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3170 - - gmx:100801654 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3170 12 120440111 120446684 Amo12g3170 12 120440111 120446684 ECH
Amo06g0395 06 5419887 5423329 Amo12g3170 12 120440111 120446684 PCT
Amo12g3170 12 120440111 120446684 Amo06g0395 06 5419887 5423329 PCT