Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2885 ATGGAGAGAACTTCGGAGGTGGAAGGTACGGTGAGGAACATTCTAGAAGAAGAGACACTGAAGTGGGTGTTCGTGGGAGGAAAAGGGGGAGTTGGAAAAACAACATGCAGCTCCATCATCTCCGTGCTCCTCTCCCAAGTCAGATCCTCCGTTCTCATCATCTCAACCGACCCTGCTCACAATCTTAGCGATGCTTTCCAGCAGAAGTTCACTCACACCCCTATTCTTGTCAACGGTTTCACCAATCTCTATGCGATGGAGGTGGATCCTGTGGCTGAACAAGAGAACCCCTCAGGCTCTGATGGAATGGAAAAATGGTTCTCAGAGTTAGCTGGTGCAATTCCTGGAATCGATGAGGCCATGAGCTTCGCGGAGATGCTAAAATTGGTGCAGACACTGGATTATTCTGTAATAGTATTTGATACTGCTCCCACTGGCCATACACTCAGGCTATTGCAATTCCCATCTGTTTTAGAGAAGGGCCTTGCAAAAATGATGTCTTTGAAAAGCAAATTTGGTGGATTGCTTAATCAGATGACTCGTATGTTTGGTATGGGTGATGATTTTGGTGATGATGCAATTCTTGGGAGGCTTGAAGGCATGAAGGATGTAATTGAACAAGTTAACCAGCAATTCAAAGATCCGGACATGACAACTTTCGTGTGTGTTTGCATTCCGGAATTCCTCTCACTTTATGAAACGGAGAGATTGGTTCAACAACTTGCAAAGTTCGAGATAGAAACACACAATATCATTATTAATCAAGTAATCCATGACGAAGAAGATGTTGAATCCAAGTTACTTCAAGCAAGAATGAAAATGCAACAGAAATATCTGAATCAATTTTATGAATTGTATGATGACTTTCACATCACCAAGTTGCCATTACTCCCAGAAGAGGTTACTGGCGTTGAAGCTCTGAAAGCATTTTCAAAACATTTTAAGACGCCGTATCAACCATCATGCAGTACAGACCCAGAGGAGCGGTTAGAGCGCAGAGTACTGGGACTAAAGCAGCAGCTAAGCGAGGCGGAAGAACAGTTGGCCATAATCAGAAAGGAGAAGGCTTGA 1071 0.4379 MERTSEVEGTVRNILEEETLKWVFVGGKGGVGKTTCSSIISVLLSQVRSSVLIISTDPAHNLSDAFQQKFTHTPILVNGFTNLYAMEVDPVAEQENPSGSDGMEKWFSELAGAIPGIDEAMSFAEMLKLVQTLDYSVIVFDTAPTGHTLRLLQFPSVLEKGLAKMMSLKSKFGGLLNQMTRMFGMGDDFGDDAILGRLEGMKDVIEQVNQQFKDPDMTTFVCVCIPEFLSLYETERLVQQLAKFEIETHNIIINQVIHDEEDVESKLLQARMKMQQKYLNQFYELYDDFHITKLPLLPEEVTGVEALKAFSKHFKTPYQPSCSTDPEERLERRVLGLKQQLSEAEEQLAIIRKEKA* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2885 356 Hamap ATPase <gene_name> [GET3]. 7 322 IPR027542 GO:0005524|GO:0016887
Amo12g2885 356 PANTHER ATPASE LOC107826790 7 355 - -
Amo12g2885 356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 310 IPR027417 -
Amo12g2885 356 Gene3D - 1 345 IPR027417 -
Amo12g2885 356 Coils Coil 327 354 - -
Amo12g2885 356 CDD ArsA 36 311 - -
Amo12g2885 356 TIGRFAM GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 24 313 IPR016300 GO:0005524|GO:0016887
Amo12g2885 356 PANTHER ARSENICAL PUMP-DRIVING ATPASE ARSENITE-TRANSLOCATING ATPASE 7 355 IPR016300 GO:0005524|GO:0016887
Amo12g2885 356 Pfam Anion-transporting ATPase 21 313 IPR025723 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2885 Amo-Chr12 115506584 115509708 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2885 K01551 - gmx:100788968 554.673