Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2884 ATGCAACTGACACTGGAATTCGGAGGGGGATTGGAGCTTCTTTGTGACTCTAAGAAGATTCACAATGTCAATGTTGAAATCCAAAATGGAGAGGACAAGCTTACTATGAAAGATTTGCTGTCTTGGGTGCGGACCAACTTGATTAAGGAGAGGCCTGAAATGTTCATGAAAGGAGATACCGTGCGACCTGGAGTTCTTGTCCTTGTGAACGATTGTGATTGGGAGTTATCTGGTCAGCTGAATACATCACTAGAAGAGAAAGATGTGGTAGTTTTCATATCAACTTTACATGGTGGCTAA 300 0.4233 MQLTLEFGGGLELLCDSKKIHNVNVEIQNGEDKLTMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLNTSLEEKDVVVFISTLHGG* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2884 99 PANTHER RURM1 PROTEIN 1 99 IPR015221 GO:0005737|GO:0034227
Amo12g2884 99 CDD Ubl_Urm1 3 99 IPR015221 GO:0005737|GO:0034227
Amo12g2884 99 PIRSF Urm1 1 99 IPR015221 GO:0005737|GO:0034227
Amo12g2884 99 Hamap Ubiquitin-related modifier 1 [URM1]. 1 99 IPR015221 GO:0005737|GO:0034227
Amo12g2884 99 Pfam Urm1 (Ubiquitin related modifier) 3 99 IPR015221 GO:0005737|GO:0034227
Amo12g2884 99 Gene3D - 1 99 IPR012675 -
Amo12g2884 99 SUPERFAMILY MoaD/ThiS 1 99 IPR016155 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2884 Amo-Chr12 115502743 115504730 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2884 K12161 - gmx:100306072 187.578