Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2874 ATGGTTTCCGAACCCGAACCAGAATCAGAATCCGAACCCGAATCTGAGTGCACCGAAATCCCCATCGATAACGATCATCCCTACCTCCACTACCAAGAAGAAGAAGAAGAAGAAGAAAAAGAGAAACACAAACCGAAAGTAGACCTACTATCTCGTAATCTCGCTTCTCCTCAGTATTCCGATAACAGCCACGACTACGACGACGATCACAACGAAGACGACGAAGAAGACGACGAGGAAGAAGAAGCCGTAACAAACAAACAAAATCATTTCAACGACGAAACGCTCATCCATCCTCATTCACTCCTTCCATCTCCCGCGCCGCCACACACTTTAAAATCCACGTCACCACCTCGAAACGAGGACGTTTCCTCCGGAATCGGCACCTTCATCAGACAGCGAAGCTCCGGCCTCTCGGACGCAATCTTAAAGAGGATCTCGACGTTTCGCCAAAACGACGACGTTTCGGACAAGAAGAAGGTGGAAATCATGGAGTTCAACCTCTCCGGTGTCAAGGTGGTAGTAGAGCAGAAACAGGAGGAAGTGAATCAACTGAAAGGAAGAATCACCTTCTTCTCGAGATCGAATTGCAGAGACTGCACCGCCGTGAGGAAATTCTTCAGAGAGAAAGGACTTCCGTACGTTGAGATAAACATCGACGTTTTCAGGGAGCGTGAGAAGGAGTTAATGGAGAGAACCGGAGTCTCAGCGGTGCCGCAGATTTTCTTCAACGAGAAGATGTTCGGCGGTTTGGTGGCGCTTAACTCGCTGCGTAGAAGCGGCGATTTCGATCGGAGGGTGGCGGAGATGCTGGCGGAGAAGTGTCCCGACGTAGCGCCGGCGCCGCCGGTGTACGGTGTCGATCCTATAAATCATGATAGGAAAGACGAACTTTATGATCAGATTAGGTTCGTACGGCAGAAAATTGTGATCAGTGATCGGTGGAGGAGGATGAAGATCGTGAGGGACTGTTTCGTTGGCGAAGAGCTCGTTAATGCTTTGGTTGAATACCTTGGTTGCGCGCGTAGCGAGGCTGTAGTGCTCGGAAAACAGTTAGCCAGGAAGCACTTCATCCACCATGTTTTCGGGGAACATGATTTTGAGGAGGGAAATCACGTATACCGTTTCCTTGAGCATGAACCTTTTATCGAAAGTTGCTACAATTTCCGTGATGCCACAAATTATAATGAACCAAAGTCTGCAGCTGTTGTTGGCGACAGGCTTACCAAGATTATGTATGCCATTCTTGAGTCCTATGCTTCTGATGACAGACAATATATTGATTATGATGCCGTTAGACAAAGTGAAGAATTTCGTAGGTATGTAAATATGACAGAGGATCTCCATCGGGTCAACCTATTGGAACTATCAGAAAACGAGAAACTTGCCTTCTTCTTAAATTTGTATAATGCCATGGTCATCCATGCTATTGTTAGAATAGGTTATCCAGAAGGTGTAATGGAAAGAATGTCATTCAATACCACTTTTCAGTATTTAATTGGAGGCAGCCCTTTTTCTATATCTGATATAAAAAATGGTGTCCTCAGATGCAATCAGAGGTCAGCATATTCCTTAGGCAAACCCTTTGGCACAGGAGACAAGCGATTGGAGGTTGTTCTTGTCAAGTTTAATCCGTTAATTCACTTTGGACTTTGTATGGGTTCAAAGTTCAGTCCAAAGATTAGATTCTTCTCAGCTCAAAGAGTAGAAGATGAATTAAGAGGTGCTACAAGAGACTTCTTTGAGAATAATAATGGAATTGAAGTGGACCTGGAGAAGAGAACAGTTCATCTCACTCCGCTTTTAAAGTGGTTCGGTGGTGATTTTGGTACAGAGAAAGATATACTAAATTGGGTACTTAATTACTTGAGTCCCAGTAAATCAGGCCTTTTGTCTCATCTCTTATGTGATGCTGGCCCTGTTAATGTTTCCTACAAGAATTTTGATTGGTCAATGAAAACTTGA 1965 0.4473 MVSEPEPESESEPESECTEIPIDNDHPYLHYQEEEEEEEKEKHKPKVDLLSRNLASPQYSDNSHDYDDDHNEDDEEDDEEEEAVTNKQNHFNDETLIHPHSLLPSPAPPHTLKSTSPPRNEDVSSGIGTFIRQRSSGLSDAILKRISTFRQNDDVSDKKKVEIMEFNLSGVKVVVEQKQEEVNQLKGRITFFSRSNCRDCTAVRKFFREKGLPYVEINIDVFREREKELMERTGVSAVPQIFFNEKMFGGLVALNSLRRSGDFDRRVAEMLAEKCPDVAPAPPVYGVDPINHDRKDELYDQIRFVRQKIVISDRWRRMKIVRDCFVGEELVNALVEYLGCARSEAVVLGKQLARKHFIHHVFGEHDFEEGNHVYRFLEHEPFIESCYNFRDATNYNEPKSAAVVGDRLTKIMYAILESYASDDRQYIDYDAVRQSEEFRRYVNMTEDLHRVNLLELSENEKLAFFLNLYNAMVIHAIVRIGYPEGVMERMSFNTTFQYLIGGSPFSISDIKNGVLRCNQRSAYSLGKPFGTGDKRLEVVLVKFNPLIHFGLCMGSKFSPKIRFFSAQRVEDELRGATRDFFENNNGIEVDLEKRTVHLTPLLKWFGGDFGTEKDILNWVLNYLSPSKSGLLSHLLCDAGPVNVSYKNFDWSMKT* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2874 654 SUPERFAMILY "Winged helix" DNA-binding domain 295 398 IPR036390 -
Amo12g2874 654 CDD GRX_DEP 187 258 - -
Amo12g2874 654 Gene3D - 294 426 IPR036388 -
Amo12g2874 654 MobiDBLite consensus disorder prediction 19 49 - -
Amo12g2874 654 SUPERFAMILY Thioredoxin-like 187 268 IPR036249 -
Amo12g2874 654 ProSiteProfiles Glutaredoxin domain profile. 177 274 - -
Amo12g2874 654 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 309 376 IPR000591 GO:0035556
Amo12g2874 654 MobiDBLite consensus disorder prediction 1 124 - -
Amo12g2874 654 MobiDBLite consensus disorder prediction 1 18 - -
Amo12g2874 654 Pfam Glutaredoxin 189 246 IPR002109 -
Amo12g2874 654 Gene3D Glutaredoxin 183 271 - -
Amo12g2874 654 SMART DEP_3 304 378 IPR000591 GO:0035556
Amo12g2874 654 ProSiteProfiles DEP domain profile. 305 378 IPR000591 GO:0035556
Amo12g2874 654 MobiDBLite consensus disorder prediction 67 82 - -
Amo12g2874 654 Pfam Protein of unknown function, DUF547 455 580 IPR006869 -
Amo12g2874 654 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 57 652 - -
Amo12g2874 654 CDD DEP 306 375 - -
Amo12g2874 654 PANTHER F26K24.21 PROTEIN 57 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2874 Amo-Chr12 115351697 115357964 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2874 - - adu:107475749 1234.94