Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2872 ATGGGCGACGGTCCAAAGAGACAAGGCGGACGCCCACTTCCTCCGCCGCCAAGAGGTCCCCCCGGCCCTCCTCCTCCTCCCCCTCGCCCCCGCGTCGAACCCGTCGATCGCGAAAAGACTTGCCCCTTGTTGCTCCGCGTCTTCACCAAGGAGGGGAGTCATCACACGATGGAGGACTTTGCTGTGAGAGGGAAAGAGCCATCGGAGGAGGTTCAGATTTACACCTGGAAGGACGCTACTCTTCGTGAATTAACCGAGCTCGTCAAAGAAGTGGTTAAACCTGCAAGAAGAAGACATGCAAAGCTCTCATTTGCTTTTGTGTTTCCTGATAAAAATGGTCGATTCAAAGTTCAAGAGGTTGGGAAGACACTGGCATATGGAAATGGAAGATTTGATGACGGCAAGGCTTTAGCCGAACTTGGTTTTGAGATTGGTGATTACTTGGATGTGGCTATTCTGTAG 462 0.5216 MGDGPKRQGGRPLPPPPRGPPGPPPPPPRPRVEPVDREKTCPLLLRVFTKEGSHHTMEDFAVRGKEPSEEVQIYTWKDATLRELTELVKEVVKPARRRHAKLSFAFVFPDKNGRFKVQEVGKTLAYGNGRFDDGKALAELGFEIGDYLDVAIL* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2872 153 Pfam Sin3 associated polypeptide p18 (SAP18) 34 152 IPR010516 -
Amo12g2872 153 MobiDBLite consensus disorder prediction 9 30 - -
Amo12g2872 153 PANTHER DEACETYLASE COMPLEX SUBUNIT SAP18, PUTATIVE-RELATED 7 153 - -
Amo12g2872 153 MobiDBLite consensus disorder prediction 1 37 - -
Amo12g2872 153 Gene3D ASAP complex, SAP18 subunit 28 153 IPR042534 -
Amo12g2872 153 PANTHER SAP18 7 153 IPR010516 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2872 K14324 - gmx:100526922 232.261