Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2640 ATGTTTACAAGAACGCTTCAATTTCAATTCCAATTAGACTCCATTGATCATAAAACAATCTTATTAGCTTTTAGACGCACTCTACTACTATTTCTCTTTTCTTCTTCAATTCTTATTAGTAGTAGTGTCCATGGCTACACCACAAGATCTCATATCTTCATCTATGCAACTTGTTCTCAAGAGAAATACCAACCAAACACACCCTTTGAACCAAACTTAAATTCTTTATTATCTTCAATTGTTACTTCCTCTTCAGATGTTTCTTACAATAGCTTTTCCATTATAAATAATAATGGAACCTCATCATCAACACCTTTATTAGAAGGTTCCATATATGGCTTGTACCAATGTAGGGGTGATTTGGACCCAATTGAATGCTCAAAATGTGTTCAAAATTCAGTTAACCAAATAGGGCTAATTTGTCCCTATTCACTTAGTGCATCTTTGCAACTTGAAGGGTGTTACATAAGATATGAACATTTTGATTTCTTAGGAAAACTTGACACAAGTCTTAGGTACAAGAAATGTAACAAAAATGTTGTGAGCAATGATGTTGAGTTCCTTAGGCGAAGGGATGATGTTCTTGGTGATTTGCAAGCAAGAAGAAATAGTGACTTTAGAGTTAGTAATTCAGGACTTGTTGAAGGGTATGCTCAGTGTTTGGGAGATCTAAGTGCTGAAAATTGCAACTCATGCATGGCAGAAGCAGTGATGAAGTTGACGAGATTTTGTGGATCAACAGTATCAGGTGATGTATTCTTGGGACAATGTTATGCAAGGTATTGGAAATCTGGCCACTACAACGATGATGAACCAGATTCTTCGAATGAGGACCAAGTGGGGAAATCAATTGCCATTATTGTAGGGGTTGTATTAGGTCTAGCCATTCTTGTTGTTGTTCTCTCAATCTGCAAAAACGCCATGGTGAAAAGAATCCATTGA 942 0.3631 MFTRTLQFQFQLDSIDHKTILLAFRRTLLLFLFSSSILISSSVHGYTTRSHIFIYATCSQEKYQPNTPFEPNLNSLLSSIVTSSSDVSYNSFSIINNNGTSSSTPLLEGSIYGLYQCRGDLDPIECSKCVQNSVNQIGLICPYSLSASLQLEGCYIRYEHFDFLGKLDTSLRYKKCNKNVVSNDVEFLRRRDDVLGDLQARRNSDFRVSNSGLVEGYAQCLGDLSAENCNSCMAEAVMKLTRFCGSTVSGDVFLGQCYARYWKSGHYNDDEPDSSNEDQVGKSIAIIVGVVLGLAILVVVLSICKNAMVKRIH* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2640 313 Gene3D - 168 264 IPR038408 -
Amo12g2640 313 Gene3D - 50 163 IPR038408 -
Amo12g2640 313 ProSiteProfiles Gnk2-homologous domain profile. 169 266 IPR002902 -
Amo12g2640 313 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 25 308 - -
Amo12g2640 313 PANTHER PLASMODESMATA-LOCATED PROTEIN 8 25 308 - -
Amo12g2640 313 ProSiteProfiles Gnk2-homologous domain profile. 51 163 IPR002902 -
Amo12g2640 313 Pfam Salt stress response/antifungal 58 159 IPR002902 -
Amo12g2640 313 Pfam Salt stress response/antifungal 176 261 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2640 Amo-Chr12 111182158 111184671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2640 110 312 Receptor kinase-like Gene Family AT5G40380 28.780 2.06e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2640 - - adu:107475641 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2640 12 111182158 111184671 Amo02g2675 02 83456353 83457533 hybridization