Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2485 ATGGAGCTTGACGGTGGTGGAAGAGCTGAGATTGATACATCGGCGCCTTTTGAATCCGTCAAGGAAGCTGTTTCTCGATTTGGCGGCCTTGGTTACTGGAAACCTATTCCCAATAATTCCCACATTCTACTTCAGCGCCAAAATGAAGAGCTTGACCCTGGAAAACTGGAAGAGCAAGCAGCAGTTATGGAGAAAGAACTAATAGTAAAAGAAAGGGAAACACTTGAAGTCTTGAAAGAACTCGAAAGTACCAAAAAGCTTGTGGAAAACTTGAAATCAAAGCTTCAGAATGAAGAATCCGAAGCAAATTTGAGGCTTCAGATGAGTGTCTGCGATAACGTATCTTCTGTCAAGGACATAGAAGAGGATAAGGAAAACCGAGCCAATCTTGTTCTTCAGCTTTCAAATGAAGGTTGTATTTCATCGTCTCCGGGTTCAATATTAATGGAACTGAAGCAGGCGAAACTGAACCTGAACAGGACTACAAATGATATCGCTGATGTGCGGGTTGCTGTGGAATTGCTTAACAAGAAGTTAGAGAAGGAAAGGATCTCCCTAGAGAAAACCCGTGAGAGGCTAACTCAGAATTCTTCAAAAATATCTTCACTTGAGGAAGAGCTAAACCAAACTAGAATTAAACTACAAGTTGCAAAAGATGCTGAAATTAAGGGCAGTTTAGATGATCCTTCCGATATCACAAAAGAGCTACAGAGATTGAGTTCCGAGGCAGATCATTTCAAGAAAATGGGAGAAGCAGCGAGATCAGAAGTCATGAGAGCAATGTCTGAGATTGAGCAGACCAAGGCTATGATAAGAACTGCCGAGATCAGGTTGGTTGCTGCCAGGAAAATGAAGGAAGCAGCTATAGCAGCCGAAGATGCCGCGCTCGCAGAAATCAAAGCCTTATCACATGGTAGTTCACCCGGAGATGGTGAGCAAAAGCATGATGGGATTACTCTTTCCTTTGAGGAGTACACTGCCCTTACTGCCAAAGCTCGAGATGCCGAGGAGCATTCCAAGAAGAGAATCGTTGATGCTATGCTTCTAGTTGACGAAGCAAACTTATCGAAAATGGACATCTTGAAAAGGGTAGAGGAGGCAACAGAAGAAGTTAAAACCAGCAAGAAGGCCTTAGAAGAAGCTTTGGAGAGGGTAGAAGCTGCAAATAGAGGAAAGCTAGAAGTTGAAGAGGCTCTAAGGAAGTGGCGATCCGATGGTCACAAAAGGCGTTCTTCTATACACAACTCTGCCAAATTCAAGAATTCATACCCGTCTCACCTCCGTCGAGATTCGCGATTGCTCGACGTGAATGGGCTAAATCTGGAAAACAGTGAAGTGAATCCTGTTCTAAACCCAACCCTATCCATAGGACAGATATTGAGCCGGAAGTTAATGGTGCCAGATGATTTTGAGGCCAGGAGAAGCTCGGCCGAAGCAAGGAGAAGCTCGGCAAAACGGAAGGTGTCGCTTGGTCAGATGCTCGGCAAACATAGTTATTATGACCCAGATCAACCTTTTGACAGGCAAGTTGAGAAAGAGAATGGTCATCATCCACAGTTCTCTTCTGCAAAGAGAAAGAAATTTGGGTTTGCTAGATTCTCTCTTCTTTTGACAAAGCAACAAAAGAAAAAGAAGCCAATGCTGAACTTGAGGTGA 1656 0.4378 MELDGGGRAEIDTSAPFESVKEAVSRFGGLGYWKPIPNNSHILLQRQNEELDPGKLEEQAAVMEKELIVKERETLEVLKELESTKKLVENLKSKLQNEESEANLRLQMSVCDNVSSVKDIEEDKENRANLVLQLSNEGCISSSPGSILMELKQAKLNLNRTTNDIADVRVAVELLNKKLEKERISLEKTRERLTQNSSKISSLEEELNQTRIKLQVAKDAEIKGSLDDPSDITKELQRLSSEADHFKKMGEAARSEVMRAMSEIEQTKAMIRTAEIRLVAARKMKEAAIAAEDAALAEIKALSHGSSPGDGEQKHDGITLSFEEYTALTAKARDAEEHSKKRIVDAMLLVDEANLSKMDILKRVEEATEEVKTSKKALEEALERVEAANRGKLEVEEALRKWRSDGHKRRSSIHNSAKFKNSYPSHLRRDSRLLDVNGLNLENSEVNPVLNPTLSIGQILSRKLMVPDDFEARRSSAEARRSSAKRKVSLGQMLGKHSYYDPDQPFDRQVEKENGHHPQFSSAKRKKFGFARFSLLLTKQQKKKKPMLNLR* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2485 551 Coils Coil 78 101 - -
Amo12g2485 551 PANTHER MYOSIN HEAVY CHAIN-LIKE 5 545 - -
Amo12g2485 551 Coils Coil 350 398 - -
Amo12g2485 551 MobiDBLite consensus disorder prediction 501 520 - -
Amo12g2485 551 Pfam Weak chloroplast movement under blue light 144 409 IPR008545 -
Amo12g2485 551 Pfam Weak chloroplast movement under blue light 9 103 IPR008545 -
Amo12g2485 551 Coils Coil 151 220 - -
Amo12g2485 551 Gene3D - 146 305 - -
Amo12g2485 551 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 5 545 - -
Amo12g2485 551 MobiDBLite consensus disorder prediction 498 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2485 Amo-Chr12 108005964 108008517 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2485 - - gmx:100783770 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo04g1991 04 88991595 88994009 Amo12g2485 12 108005964 108008517 PCT
Amo12g2485 12 108005964 108008517 Amo04g1991 04 88991595 88994009 PCT