Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2415 ATGGAACCTGCCTTAGGGAAACCGGGCTTCTTCCGGAACGTAATGGTACGGTTACTAGTCTTCGGTGTTTTTGTTGTCATTGTACGTTTCGCTTACGTCATTACTGTCGCCGGAGAATCCTGCACCGTCGGCGATTTCTGCTTCTTCTCTATCCCGCAGAGAGTTAACCTCGCCGTCGCCGGCGCCGGATCCGGCMGAGGCCCCCTCGCCGCACGCACCATCGCCGTATCTTCTGGCGAAACTAGCAAGGAGTGGATCGGCGCCGTGCGGTTCTACTCCTCGGTGTTCCAGGACCTCATGGCCGGAGGTTACCTCTCTCCGGAGTCGAAGTCGCTCTGCGTGGAATCTCCGGCTGGACAAGACGTCGTGGCGCTGAGGGAGATCGGCGTCGTTGACGCCGTCGGAATTGCGAAAAAACCGTCGAAGCCGCTGGTGAAGTCCGGCGAGGGTAAGCGGATTCCGTTTGGCGAGGATTCGTTCGATTTCATCTTCTCCGCCGCCGGAGGGATTGAGCGGTCATCGGCGCCGGTTGAGTTCGCGGSGGAGGTCGGCCGGACGCTGCGACCGGGAGGTATTGCTGTTTTCCATGTAAAGGCAAACGATACTTACAGCTTCAATTCATTTGTCGATTTATTCAATTGGTTTGATTCATCAATGCCTCACATTAGAGAAMTTGTTCTGAGAAAAGAAGGTGCTAGGGTTAGTTCTGATCCCAAATCAGGTTCCAGTTCTAAYGGAAAATGCTATGTTCCTGGGTACAAGCAAGAATTGGTTAACCATGCTGAGCCTTTGATTGAAGAGGAACCATTGAAACCATGGATCACTCTCAAGAGGAATGTGAAGAACATAAAGTACCTTCCTTCAATGGTTGATATTAGTTTCAAGAATAGGTATGTGTATGTTGATGTTGGAGCTAGAAGCTATGGYTCTAGCATTGGGAGCTGGTTTAGAAAGCAGTATCCGAAACAGAACAAGACCTTCCATGTGTATGCAATTGAAGCAGATAAGCATTTTCACAAGGAGTATGAGTTGAAGAAAGGGATCACATTGCTTCCATATGCTGCTTGGGTGAAGAATGAGACCTTGACATTTGAGATTAATGGCGATCCTGGCGACAAGGAGAAGGTTGCAGCTGCGAAAGGAAGAGGGATGGGAAGGATTCAACCGGTGAAGAATCCCRGTGGGTTCGATGGTGGTGAGRTTGAGAGGATTCAAGGCTTTGATTTTGCCGATTGGCTRAAGAACACGGTTTCGGAGAATGATTTTGTTGTTATGAAGATGGACGTTGAGGGTACTGAGTTTGATCTTATTCCAAGGTTGTTTGAAACCGGTGCCATATGTTTGGTTGATGAGATTTTTCTTGAGTGCCATTACAATAGGTGGCAGAGGTGTTGCCCTGGACAAAGGAGTCCAAAGTATGAGAAAACATATGATCAATGCTTGCAGCTATTCACTTCTCTTAGACAAAGTGGTGTTCTTGTTCATCAATGGTGGTAA 1497 0.4836 MEPALGKPGFFRNVMVRLLVFGVFVVIVRFAYVITVAGESCTVGDFCFFSIPQRVNLAVAGAGSGRGPLAARTIAVSSGETSKEWIGAVRFYSSVFQDLMAGGYLSPESKSLCVESPAGQDVVALREIGVVDAVGIAKKPSKPLVKSGEGKRIPFGEDSFDFIFSAAGGIERSSAPVEFAXEVGRTLRPGGIAVFHVKANDTYSFNSFVDLFNWFDSSMPHIREXVLRKEGARVSSDPKSGSSSNGKCYVPGYKQELVNHAEPLIEEEPLKPWITLKRNVKNIKYLPSMVDISFKNRYVYVDVGARSYGSSIGSWFRKQYPKQNKTFHVYAIEADKHFHKEYELKKGITLLPYAAWVKNETLTFEINGDPGDKEKVAAAKGRGMGRIQPVKNPXGFDGGEXERIQGFDFADWLKNTVSENDFVVMKMDVEGTEFDLIPRLFETGAICLVDEIFLECHYNRWQRCCPGQRSPKYEKTYDQCLQLFTSLRQSGVLVHQWW* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2415 498 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 152 213 IPR029063 -
Amo12g2415 498 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 284 440 IPR029063 -
Amo12g2415 498 Pfam Methyltransferase domain 146 195 IPR013216 GO:0008168
Amo12g2415 498 Gene3D Vaccinia Virus protein VP39 124 242 IPR029063 -
Amo12g2415 498 PANTHER METHYLTRANSFERASE 1 498 - -
Amo12g2415 498 PANTHER METHYLTRANSFERASE 1 498 - -
Amo12g2415 498 Pfam Methyltransferase FkbM domain 302 464 IPR006342 -
Amo12g2415 498 Gene3D Vaccinia Virus protein VP39 283 462 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2415 Amo-Chr12 106612202 106613731 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2415 - - gmx:121174389 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2415 12 106612202 106613731 Amo12g2415 12 106612202 106613731 ECH
Amo12g2415 12 106612202 106613731 Amo02g2633 02 82625321 82626850 hybridization