Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2412 ATGGCGGCTTCTAATGACTCAGAGACAAAGATAAATGTTCAGTCCGTGCCGGCAAGCACGGAGGAAAGAAGTGGTGGCGGCGGTGGAGATGGCATTGCAGGGATACTACAGCGTTATAGGAGGGAGGACTTGGTTGAGAGAGGGTCTTTGTGGTTGAGAAGGGTTGCTTTTGTTTTCTCTTTTATTTCTTTCTTCGTTGTGGTCACCAATGAACATGGCGATTGGAAAGAGTTTCACAAGTATCAGGAGTACAGGTATTTGTTGGCCGTAGCAATTCTTTCTAGTTTGTACACTGGAATCCAATGTTTTCGCCAAGTTATGGGGAAAAATATGATTCAACCAAATATTGCAGTTCTTGTTGATTTCTTTGGAGATCAGATAATGGCATACCTGTTAATATCATCAGCATCAGCAGCAATTCCAATAACAAACAGAATGAGAGAAGGAGCAGACAATGCATTCACAGACACATCAACCGCCGCAATTAGCTTGTCCTTCTTTGCATTTTTGTGCTTAGCACTCTCAGCCATCATTTCTGGATACAAATTATCAACTCAAACTAATATATAA 570 0.4158 MAASNDSETKINVQSVPASTEERSGGGGGDGIAGILQRYRREDLVERGSLWLRRVAFVFSFISFFVVVTNEHGDWKEFHKYQEYRYLLAVAILSSLYTGIQCFRQVMGKNMIQPNIAVLVDFFGDQIMAYLLISSASAAIPITNRMREGADNAFTDTSTAAISLSFFAFLCLALSAIISGYKLSTQTNI* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2412 189 Pfam Casparian strip membrane protein domain 45 171 IPR006702 -
Amo12g2412 189 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 22 187 - -
Amo12g2412 189 PANTHER CASP-LIKE PROTEIN 4B1 22 187 - -
Amo12g2412 189 MobiDBLite consensus disorder prediction 1 21 - -
Amo12g2412 189 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2412 Amo-Chr12 106569074 106571821 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2412 - - ahf:112751221 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2412 12 106569074 106571821 Amo02g2635 02 82652108 82654405 hybridization