Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2318 ATGGCATCTAAGCAACAAAAACAAGAGCTTGATGAAAGGGCAAAACAGGGAGAGACTGTGGTCCCTGGTGGAACTGGTGGCAAGAGCAAGGGAGGGCAAACAAGGAGGGAGCAGTTAGGAACAGAAGGATACCAAGAGATGGGTCGCAAGGGTGGATTTAGCACCATGGAAAAATCTGGAGGAGAGCGTGCTGAAGAGGAAGGCGTTGAGATTGATGAGTCCAACATGGCATCTAAACAACAAAACCGACAAGAGCTTGATGAAAGGGCAAAACAGGGAGAGACTGTGGTCCCTGGTGGAACTGGAAGGAGCAAGGGAGGGCAAACAAGGAGGGAGCAGTTGGGAACAGAAGGGTACCAAGAGATGGGTCGTAAGGGTGGATTCAGCACCATGGAGAAATCTGGAGGAGAGCGTGCTGAAGAGGAAGGCGTTGAGATTGACGAGTCCAAGTTTACCACCAAGAACCAAAACAACATGGCATCTAAGCAACAAAACCGACAAGAGCTTGATGAAAGGGCAAAACAGGGAGAGACTGTGGTTCCTGGTGGAACTGGAAGGAGTAAGGGAGGGCAAACAAGGAGGGAGCAGTTGGGAACAGAAGGGTACCAAGAGATGGGTCGCAAGGGTGGATTCAGCACCATGGAGAAATCTGGAGAAGAGCGTGCTGAAGAGGAAGGTGTTGAGATTGATGAGTCCAAGTTTGCCACCTAG 711 0.5049 MASKQQKQELDERAKQGETVVPGGTGGKSKGGQTRREQLGTEGYQEMGRKGGFSTMEKSGGERAEEEGVEIDESNMASKQQNRQELDERAKQGETVVPGGTGRSKGGQTRREQLGTEGYQEMGRKGGFSTMEKSGGERAEEEGVEIDESKFTTKNQNNMASKQQNRQELDERAKQGETVVPGGTGRSKGGQTRREQLGTEGYQEMGRKGGFSTMEKSGEERAEEEGVEIDESKFAT* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2318 236 Coils Coil 69 89 - -
Amo12g2318 236 ProSitePatterns Small hydrophilic plant seed proteins signature. 176 184 IPR022377 -
Amo12g2318 236 ProSitePatterns Small hydrophilic plant seed proteins signature. 93 101 IPR022377 -
Amo12g2318 236 PANTHER PROTEIN SLE3 1 74 - -
Amo12g2318 236 MobiDBLite consensus disorder prediction 134 149 - -
Amo12g2318 236 PANTHER PROTEIN SLE3 159 236 - -
Amo12g2318 236 PANTHER PROTEIN SLE3 76 155 - -
Amo12g2318 236 MobiDBLite consensus disorder prediction 1 16 - -
Amo12g2318 236 MobiDBLite consensus disorder prediction 213 236 - -
Amo12g2318 236 ProSitePatterns Small hydrophilic plant seed proteins signature. 17 25 IPR022377 -
Amo12g2318 236 PANTHER EM-LIKE PROTEIN GEA1 76 155 IPR000389 -
Amo12g2318 236 MobiDBLite consensus disorder prediction 59 73 - -
Amo12g2318 236 PANTHER EM-LIKE PROTEIN GEA1 1 74 IPR000389 -
Amo12g2318 236 MobiDBLite consensus disorder prediction 150 164 - -
Amo12g2318 236 Pfam Small hydrophilic plant seed protein 29 74 IPR038956 -
Amo12g2318 236 Pfam Small hydrophilic plant seed protein 187 234 IPR038956 -
Amo12g2318 236 Pfam Small hydrophilic plant seed protein 104 151 IPR038956 -
Amo12g2318 236 PANTHER EM-LIKE PROTEIN GEA1 159 236 IPR000389 -
Amo12g2318 236 MobiDBLite consensus disorder prediction 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2318 Amo-Chr12 104375349 104381773 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2318 - - aip:107625779 259.61