Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2313 ATGTGCCATTCATTCGTTCCCCAAACCATGATCATCAAATTAAAGATGGTGCCTCAAGGAGGAAAGTTTCCTATGAGCACAATTTGTGTTCTCTTGTTCATTGCCATATTCTATGTGCAAAGACTTAGCTTCCTCTATTCCACCACCACCTTCAATATTTTCAATAATTCCAAGCCTTGCCCAACATTAAACAATACCAAACATGGATCTGATGGTGATAAACTTACACAAAAGGAAGTAATAAATGTGACATGGATTAATGACATATTTGATTTAGAAGAGGAAGAGGAGGAGGAGGAGTGCAACTTTGCAAATGGAAAATGGGTGTTTAACAATTCAATAAAGCCTTTGTACACAGACAAAAGTTGTCCTTACATAAGTAGACCTTTTTCATGTGTCAAGAATGGAAGGGTAGATTCTCACTACATCAATTGGGAATGGCAGCCACAACATTGCACTTTACCACAATTTGATCCGAAGCTAGCTCTAAAGAAGCTTCAAGGAAAGAGGTTGCTATTTGTAGGGGATTCACTTCAACAAAACCAATGGGAATCTTTTATTTGTATGGTTGAATGGATCATACCTGAAGACCAAAAATCTATGAAACGTAGAAATGTTCATTCAGTCTTCCAAGCCAAGGAATACAATGCCAGCATAGAATTCTATTGGGCCCCAATGCTTGTGGAATCCAACACCGAGTTCTTTGTTGTGAGAGATCCCCAAAAGAAGATAGTGAAAGTTGATTCAATCATGGAACGTGCCAAAAACTGGACAGGAGTGGACATACTTGTCTTCAATTCCTATGTTTGGTGGATGAACCCTCCTGTCATTAAAACGCTATGGGGTTCATTTGGAAATGGGGATGATGGGTATGAAGAATTGGATGCAAAAATTGCTTACAACTTAGGTTTGAGGACATGGGCAAATTGGATTGACTCAACTATAAATCCAAACAAAACCAGGGTCTTCTTCACAACTATGTCCCCTATACACACAAGAAGCTCAGATTGGGGCAAGAAGGATGATATGAAGTGTTTCAATGAGACAAAGCCAGTAACGAAGAAGAATCACTGGGGAAGTGGTTCAGATAAGGGGATGATGAGTGTGGTGGCGAAGGTGGTGAAGAAGATGAAAGTTGCAGTTACTTTTATTAACATAACACAAATTTCAGAGTATAGGATTGATGCTCATTCCTCAGTTTACACTGAAACTTGGGGGAGATTGTTGACTAAGGAGGAAAAATCTAACCCACAAAATGCAGATTGTGTACATTGGTGTTTGCCTGGACTTCCAGATACTTGGAATAGAATATTTTTAACAATGTTGTGA 1329 0.3898 MCHSFVPQTMIIKLKMVPQGGKFPMSTICVLLFIAIFYVQRLSFLYSTTTFNIFNNSKPCPTLNNTKHGSDGDKLTQKEVINVTWINDIFDLEEEEEEEECNFANGKWVFNNSIKPLYTDKSCPYISRPFSCVKNGRVDSHYINWEWQPQHCTLPQFDPKLALKKLQGKRLLFVGDSLQQNQWESFICMVEWIIPEDQKSMKRRNVHSVFQAKEYNASIEFYWAPMLVESNTEFFVVRDPQKKIVKVDSIMERAKNWTGVDILVFNSYVWWMNPPVIKTLWGSFGNGDDGYEELDAKIAYNLGLRTWANWIDSTINPNKTRVFFTTMSPIHTRSSDWGKKDDMKCFNETKPVTKKNHWGSGSDKGMMSVVAKVVKKMKVAVTFINITQISEYRIDAHSSVYTETWGRLLTKEEKSNPQNADCVHWCLPGLPDTWNRIFLTML* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2313 442 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 21 442 IPR029962 GO:0016413
Amo12g2313 442 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 154 441 IPR026057 GO:0016740
Amo12g2313 442 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 21 442 - -
Amo12g2313 442 Pfam PMR5 N terminal Domain 99 152 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2313 Amo-Chr12 104246779 104254159 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2313 - - gmx:100816250 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2313 12 104246779 104254159 Amo12g2313 12 104246779 104254159 ECH