Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2281 ATGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGGTAGGACCTGTGAGGCCTGAATTTGTGTTGTTTGGTTCATCCATTGTTCAACTTAGTTTTGGTGATGAAGGTTGGGGATCTATTCTTGCCAATTTGTATGCTCGCAAGGCTGATATAGTCCTGCGAGGATACTCCGGTTGGAATTCAAGACGCGCTTTGGAGGTTCTTGATAAAGTATTTCCCAAGGATGCCAATGTACAACCATCATTAGTAATTGTTTACTTTGGTGGCAATGATTCGGTTCGACCAAACCCACATGGTCTTGGTTCTCATGTACCCCTTCAAGAATACAAGGAAAATATGAGGAAGATAGCCATCCATCTTAAGAGCTTGTCGAAGAAAACTCGCCTAATATTTCTGAGTTCTCCACCCATCAACGAGGAACAAATCCGCAGTACACTCAGTAAACAACTGGGGGATTTAGGAAGGACAAACGAATCCTGTCGAATATATTCCGAAGCATGTTTGGAGGTGTGCCGCGAGATGAATGTCGAGGCCATTGATCTCTGGTCTGCACTACAGAAAAGGAATGACTGGTTAAATGTTTGCTTCAAGGATGGGATTCATCTAGCATCTGAAGGAAGCAAGATTGTGGCAAAAGAGATATTGAAGGTTCTTAGAGAAGCAGACTGGGAACCTAGTTTGTACTGGAAGTCAATGGCAACAGAATTTTCAGAAGACTCACCATATGATCCAACTGGTGTTGATGCAAAGACCCCTATAAATGTTTCTAATTGGATCTTCCAGGAAAGTTTTCAATGGGACTAG 804 0.4291 MREREREREREMVGPVRPEFVLFGSSIVQLSFGDEGWGSILANLYARKADIVLRGYSGWNSRRALEVLDKVFPKDANVQPSLVIVYFGGNDSVRPNPHGLGSHVPLQEYKENMRKIAIHLKSLSKKTRLIFLSSPPINEEQIRSTLSKQLGDLGRTNESCRIYSEACLEVCREMNVEAIDLWSALQKRNDWLNVCFKDGIHLASEGSKIVAKEILKVLREADWEPSLYWKSMATEFSEDSPYDPTGVDAKTPINVSNWIFQESFQWD* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2281 267 CDD Isoamyl_acetate_hydrolase_like 20 218 - -
Amo12g2281 267 Coils Coil 106 126 - -
Amo12g2281 267 SUPERFAMILY SGNH hydrolase 18 221 - -
Amo12g2281 267 Gene3D SGNH hydrolase 17 243 IPR036514 -
Amo12g2281 267 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 12 261 - -
Amo12g2281 267 Pfam GDSL-like Lipase/Acylhydrolase family 22 208 IPR013830 -
Amo12g2281 267 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 12 261 IPR045136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2281 Amo-Chr12 103220674 103224943 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2281 K23978 - gmx:100796512 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2281 12 103220674 103224943 Amo12g2281 12 103220674 103224943 ECH
Amo12g2281 12 103220674 103224943 Amo02g2522 02 79002104 79006705 hybridization