Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2190 ATGAACCCCTCATTGACGAAGAAGCCTTTTGTGCTGCTCTGCATCGTTCTCTGCACGTTCTTCACTTTCGTCCTCTCTGAGGATTCTGAGAAGAATGCCTTTCGGGAGCGCGAAGCCTCCGAAGACACTCTCGGATACCCCGAAATAGATGAGGATGCGTTGGTGAATTCGAAATGCCCTAAGAATTTGGAGCTGAGATGGCAAACGGAAGTTAGTTCTAGTATATATGCGACCCCATTGATTTCTGATATTAACAGCGATGGGAAGCTTGAGATTGTGGTTCCATCCTTTGTACACTACCTTGAAGTTCTGGAAGGTTCAGATGGTGACAAAATGCCAGGCTGGCCTGCTTTCCACCAATCAACTGTGCATTCTAGTCCTCTACTATATGACATTGACAAAGATGGGGTGAGAGAAATAGCTTTGGCAACCTACAATGGTGAAGTGCTGTTTTTCAGGGTTTCTGGCTATATGATGTCAGATAAGCTGGTGGTCCCACGTAGGAAAGTGGCAAAAAATTGGTATGTGGGTTTGAACGCTGACCCAGTTGATCGATCTCATCCAGATGTTCATGATGATCAACTTGCTGAAGAAGCCACTATATTTAATTCTATGGCTCAAACTAATGGGAAGCACAAAGTCAACTCTTCAGCTGCCACATCAACGGAAAACCACCATGAAACACCCAGTGTGTCTAATCCAGAGCATGTAAAGCAAACAAATGGAACTCAAGTAGAAGAGAATAGTAAGATGCCAAAAACAGCTGGTAATTCCTCTGGGAATGCTGGTGTTCAGATGCCGGCAAATGCTGATAATTCATCTGTGAATGCTGGTATTCAGATGCCATCAAATGCTGATAATTCCTCTGCGAATGCTGGTATTCAGATACCAGCAAATGCTGATAATTCCTCTGTGAATGCTGGTATTAAGATGCCAGGAAATGCTGATAATTCCTCCATGGGTGCTGGGTCAGTGGAAGCTGCTAAAACAGATAACCAAACTAGCACAAAGAGACGCCTGCTGGAGGTTAATTCCAAAGGAGAAGAGCTAGGTGGCTCTGAATCCAAAGAGGGTAATGAGGGTAACCATGCTGCAACTGTCGAGAATGATGAAGGCCTGGAAGCAGATGCTGATTCATCTTTTGAGCTATTTCGCAACAGCGATGAACTGGCTGATGAATATAACTATGATTATGATGATTATGTTGATGAATCAATGTGGGGTGACGAAGAATGGACTGAAGTTAATCATGAGAAATTAGAGGATTATGTGAATGTTGACTCACATATCTTGTGCACTCCTGTCATTGCTGATATTGACAATGATGGTGTATCGGAAATGATTGTTGCTGTTTCTTATTTCTTTGATCACGAGTATTATGACAACCAGGAGCACTTGAAAGAACTGGGTGATATTGACATTGGGAAATATGTTGCTGGTGGTATTGTTGTTTTTAATCTGGATACAAAACAAGTTAAGTGGACTGCAGAACTCGATCTTAGTACTGATACTTCAAACTTCCGAGCATACATATATTCTTCTCCAACTGTTGTAGATTTAGATGGTGATGGAAATCTGGACATTCTTGTTGGGACTTCTTATGGACTATTCTATGTGCTGGATCATCATGGTAAGATTAGAGAGAAGTTCCCTCTTGAAATGGCCGAGATTCAAGGGGCTGTTGTTGCAGCTGACATTAATGATGATGGGAAAATTGAGCTAGTTACTGCTGATATACATGGAAATGTCGCTGTATGGACTCCAAAAGGTAGTTTGATATGGGAAAAACATCTGAAGAGTCTTATTCCACAGGGCCCAACTATAGGTGATGTCGATGGGGATGGCCATACTGAGCTTGTTGTGGCAACACTATCTGGGAAGATTCATGTTCTTGATGGCAAGGATGGGGGATCTATTGGGAGGTATCCATATCAAACACATGGGAGAGTGATGAATCAAGTTCTTCTAATTGATTTAAGTAAACCCAAGGAGAAAAAGAAGGGATTGACTATTGTTACTACATCATTTGATGGTTATTTGTACCTCATTGATGGGCCTACTGGCTGTGCTGATGTTGTTGATATTGGTGAAACCTCATATAGCATGGTCTTGGCAGACAATGTAGATGGTGGGGATGACCTTGATTTAATTGTTACAACAATGAACGGCAATGTCTTTTGCTTCTCAACTCCATCGCCTCATCATCCTCTCAAGGCTTGGAGGTTGCCTCATCAAGGAAGAAATAATGTTGCAACTCGGTATGGTCGTGAAGGTATCTATGTTACTCATCCTTCTAGAGCATTTCGCGATGAAGAAGGCAAGAACTTTTGGGTGGAAATTGAGATTGTAGATAATTACAGATACCCATCTGGGCATCAAGGACCCTACAATGTCACTGTATCGTTACTAGTTCCCGGTAATTACCAAGGTGAGCGAACGATAAAGCAGAATCAGATATATGCTCAACCCGGTAAATATCGGATTAAGCTTCCAACTGTGGCAGTAAGGACCACAGGAATGGTATTGGTTGAGATGGTTGACAGGAATGGAATATATTTCTCTGATGATTTCTCGCTGACATTCCATATGCACTACTATAAACTGTTGAAGTGGCTTCTTGTCTTCCCTATGCTTGGGATGTTTGGGCTCACTCATCCGCTTAAGTAA 2667 0.4222 MNPSLTKKPFVLLCIVLCTFFTFVLSEDSEKNAFREREASEDTLGYPEIDEDALVNSKCPKNLELRWQTEVSSSIYATPLISDINSDGKLEIVVPSFVHYLEVLEGSDGDKMPGWPAFHQSTVHSSPLLYDIDKDGVREIALATYNGEVLFFRVSGYMMSDKLVVPRRKVAKNWYVGLNADPVDRSHPDVHDDQLAEEATIFNSMAQTNGKHKVNSSAATSTENHHETPSVSNPEHVKQTNGTQVEENSKMPKTAGNSSGNAGVQMPANADNSSVNAGIQMPSNADNSSANAGIQIPANADNSSVNAGIKMPGNADNSSMGAGSVEAAKTDNQTSTKRRLLEVNSKGEELGGSESKEGNEGNHAATVENDEGLEADADSSFELFRNSDELADEYNYDYDDYVDESMWGDEEWTEVNHEKLEDYVNVDSHILCTPVIADIDNDGVSEMIVAVSYFFDHEYYDNQEHLKELGDIDIGKYVAGGIVVFNLDTKQVKWTAELDLSTDTSNFRAYIYSSPTVVDLDGDGNLDILVGTSYGLFYVLDHHGKIREKFPLEMAEIQGAVVAADINDDGKIELVTADIHGNVAVWTPKGSLIWEKHLKSLIPQGPTIGDVDGDGHTELVVATLSGKIHVLDGKDGGSIGRYPYQTHGRVMNQVLLIDLSKPKEKKKGLTIVTTSFDGYLYLIDGPTGCADVVDIGETSYSMVLADNVDGGDDLDLIVTTMNGNVFCFSTPSPHHPLKAWRLPHQGRNNVATRYGREGIYVTHPSRAFRDEEGKNFWVEIEIVDNYRYPSGHQGPYNVTVSLLVPGNYQGERTIKQNQIYAQPGKYRIKLPTVAVRTTGMVLVEMVDRNGIYFSDDFSLTFHMHYYKLLKWLLVFPMLGMFGLTHPLK* 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2190 888 PANTHER PROTEIN DEFECTIVE IN EXINE FORMATION 1 10 883 - -
Amo12g2190 888 Gene3D - 355 735 IPR015943 GO:0005515
Amo12g2190 888 SUPERFAMILY Integrin alpha N-terminal domain 67 652 IPR028994 -
Amo12g2190 888 MobiDBLite consensus disorder prediction 207 331 - -
Amo12g2190 888 MobiDBLite consensus disorder prediction 207 363 - -
Amo12g2190 888 PANTHER - 10 883 IPR045232 -
Amo12g2190 888 MobiDBLite consensus disorder prediction 332 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2190 Amo-Chr12 100892067 100899320 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2190 - - gmx:100805038 1437.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2190 12 100892067 100899320 Amo12g2190 12 100892067 100899320 ECH