Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2183 GCGTGCACTATTCCCTTGGACACTGTAAAAGTTAGGCTTCAGCTTCAAAAACAAGCTTTAGGTGCCCATGTGGTGACGACCCCTAAATATAAGGGTATGATGGGGACTGTTGCGACCATTGCTAGGGAAGAAGGTCTTGCATCACTCTGGAAGGGCATTGTCCCGGGGCTACATCATCAATGTTTGTATGGAGGTTTAAGAATTGGGTTGTATGATCCTCAACTTGTGCTATTCATTTCTATCATATTCAATGCAAACAACCTAATAATGAGTTCTTTCTATATGTACTACCATCCAATAGGTGTTGTGGCAATTGCAGTGGCGAATCCAACAGATCTTGTTAAAGTTAGACTTCAAGCAGAAGGAAAATTGCCTCCTGGTGTGCCAAGGCGTTACTCTGGATCTTTAAATGCATATTCTACAATTGTAAAACAGACGATTTTGAAATTGCCAGGCTTCTCTGATAATGTTGTAACTCATCTCCTTTCTGGTCTAGGGGCAGGGTTTTTTGCTGTTTGTATTGGATCCCCAGTTGACGTGGTAATTTATTTTATCAGTGTTCATTCACTCATAGTATCTATAGTTAACATGGAAAACACATCTTAA 606 0.4043 ACTIPLDTVKVRLQLQKQALGAHVVTTPKYKGMMGTVATIAREEGLASLWKGIVPGLHHQCLYGGLRIGLYDPQLVLFISIIFNANNLIMSSFYMYYHPIGVVAIAVANPTDLVKVRLQAEGKLPPGVPRRYSGSLNAYSTIVKQTILKLPGFSDNVVTHLLSGLGAGFFAVCIGSPVDVVIYFISVHSLIVSIVNMENTS* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2183 201 Pfam Mitochondrial carrier protein 2 72 IPR018108 -
Amo12g2183 201 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 77 IPR018108 -
Amo12g2183 201 PANTHER MITOCHONDRIAL UNCOUPLING PROTEIN 1 143 181 - -
Amo12g2183 201 SUPERFAMILY Mitochondrial carrier 2 190 IPR023395 -
Amo12g2183 201 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 143 181 - -
Amo12g2183 201 Gene3D Mitochondrial carrier domain 1 153 IPR023395 -
Amo12g2183 201 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 2 145 - -
Amo12g2183 201 PANTHER MITOCHONDRIAL UNCOUPLING PROTEIN 1 2 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2183 Amo-Chr12 100605741 100607363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2183 2 181 Miscellaneous Gene Families AT3G54110 60.094 1.23e-80 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2183 K15103 - gmx:100820456 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2183 12 100605741 100607363 Amo12g2183 12 100605741 100607363 ECH
Amo04g1559 04 73841865 73845949 Amo12g2183 12 100605741 100607363 PCT