Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2182 ATGTCTAAAGACAATGACGTGGAAAACCCAACTACTAACCCAAGCATCAAAGTTGAAAAGGATGCCAATCTGAGTGCTACTGCTACTGCGACTGTTCCTGATGTTGATAACAAGGGAAATTGGTACAATGCTTTGTTGCAACAAATCTCAGTGTATGGTGTTGCTGCTGGTTATTGTTTATCTGCATCACTGCTCTCAATTATCAACAAATGGGCTGTAATGAAGTTCCCTTACCCAGGTGCATTGACAGCCCTGCAATACTTCACTAGCGCGGCTGGAGTCTTTATTGTTGGCCGGCTCAAGCTCGTTGAGCATGATCCTCTTGATTTATTGACAATGTGGAGGTTTTTACCTGCTGCTATCATTTTTTATCTCTCGCTCTTCACCAACAGTGAGCTGCTCTTGCATGCCAATGTGGATACATTTATTGTATTCCGGTCGGTTGTACCGATCTTTGTCGCAGTAGGGGAGACTCTGTTCCTTCACCAGCCATGGCCCACGCTGAAGACATGGGCATCCCTGGCCACAATCTTTGCGGGGAGTGTGCTTTATGTTGCAACGGATTATCAGTTTACTTTCATGGCCTATAGCTGGGCGCTTGCGTATTTAATCAGTATGACCATAGATTTTGTTTACATAAAGCATGTTGTGATGACAATCGGATTGAACACCTGGGGTCTTGTGTTGTACAACAATCTTGAGGCTCTACTGCTTTTTCCGTTGGAGCTGATGATTATGGGTGAGCTGAAGAAGATTAAGCATGAGATTTCTGATGAATCAGATTGGTACTCTTTCGAAGTGGTTTTGCCAGTGGGATTATCATGTTTGTTTGGTCTATCTATTTCTTTCTTCGGGTTTTCTTGCCGCAGGGCGATTTCTGCAACAGGGTTTACAGTTCTTGGTATAGTGAACAAGTTGTTGACGGTGGTGATTAATCTGGTAGTTTGGGACAAGCATTCAACATGGGTGGGAACTGTGGGACTTTTGATTTGCATGCTGGGTGGGATTATGTATCAACAATCAACAAGTAAGCCAAAGGCTGCAAAAGAAGCAACTGCACAGGAAGGTGAGGAGGAAGAACAGAAATTACTTGAATTGCAAGACAATTCAGTGACCGACAATAATGATAATGAAGTCCTTAGTAAATCAAGGGAAGAAAAATGA 1164 0.4313 MSKDNDVENPTTNPSIKVEKDANLSATATATVPDVDNKGNWYNALLQQISVYGVAAGYCLSASLLSIINKWAVMKFPYPGALTALQYFTSAAGVFIVGRLKLVEHDPLDLLTMWRFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSVVPIFVAVGETLFLHQPWPTLKTWASLATIFAGSVLYVATDYQFTFMAYSWALAYLISMTIDFVYIKHVVMTIGLNTWGLVLYNNLEALLLFPLELMIMGELKKIKHEISDESDWYSFEVVLPVGLSCLFGLSISFFGFSCRRAISATGFTVLGIVNKLLTVVINLVVWDKHSTWVGTVGLLICMLGGIMYQQSTSKPKAAKEATAQEGEEEEQKLLELQDNSVTDNNDNEVLSKSREEK* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2182 387 PANTHER SOLUTE CARRIER FAMILY 35 27 371 - -
Amo12g2182 387 Coils Coil 349 369 - -
Amo12g2182 387 MobiDBLite consensus disorder prediction 347 387 - -
Amo12g2182 387 MobiDBLite consensus disorder prediction 350 366 - -
Amo12g2182 387 Pfam Triose-phosphate Transporter family 62 338 IPR004853 -
Amo12g2182 387 PANTHER GDP-MANNOSE TRANSPORTER GONST3 27 371 IPR029665 GO:0005794|GO:0015780
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2182 Amo-Chr12 100515509 100517453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2182 21 386 Lipid Metabolism Gene Families AT1G76340 77.384 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2182 - - adu:107474962 705.286