Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2162 ATGGGATTAATATTTGGAAAAATTGCTGTTGAGACACCAAAGTATGAAGTAGTGAAATCCACACAAGACTATGAAATCCGAAAATATGCACCATCAGTGGTGGCTCAAGTCACGTATGATCCATCATTGCCACAGTTTAAGGGTAACAAAGATGGTGGATTCATGGTTCTTGCAAACTACATTGGTGCCTTAGGGAACCCACAGAACACAGAGCCTGAAAAGATTGCCATGACTGCGCCAAAGATTGCTATGACTGCCCCAGTTGTGACCAAAGATGGAAGTGGTGGCGACGGCGGCGAAGCCAAGAAGATGGTTACCATGCAGTTTATTTTGCCATCTGTATATGAGAAAGCTGAGGATGCACCAAAGCCTATTGATGAGAAGGTTGAGATCAAGGAAGAGGGAGAGAGGAAGTATGGTGTGGTGAAGTTTAGTGGAGTTGCATCAGATGGGGTTGTGAACGAGAAAGTTGAGAAGCTGAAGGGGTGTTTGGAGAGAGATGGGTATAAGGTGATTGGGGATTTCTTGTTAGCTAGGTACAATCCACCATGGACAATACCTATGTTTAGGACTAATGAGTTGACTGCTGAAAAATTCTACCGAGTGGACCTCAGAATTAAACTTCATCTCAAATTTACACATGAAACACAACATGAAGAAGGAAGAGAACACAGTGATACATATTCAAAATTCTCATCCAGAGAAGAGCTTCACTATAATAATTATGATATTCAAAACTATAAGGGGGAGTCTTAA 756 0.4167 MGLIFGKIAVETPKYEVVKSTQDYEIRKYAPSVVAQVTYDPSLPQFKGNKDGGFMVLANYIGALGNPQNTEPEKIAMTAPKIAMTAPVVTKDGSGGDGGEAKKMVTMQFILPSVYEKAEDAPKPIDEKVEIKEEGERKYGVVKFSGVASDGVVNEKVEKLKGCLERDGYKVIGDFLLARYNPPWTIPMFRTNELTAEKFYRVDLRIKLHLKFTHETQHEEGREHSDTYSKFSSREELHYNNYDIQNYKGES* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2162 251 Pfam SOUL heme-binding protein 10 194 IPR006917 -
Amo12g2162 251 Gene3D Regulatory factor, effector binding domain 9 201 IPR011256 -
Amo12g2162 251 PANTHER HEME-BINDING PROTEIN-RELATED 2 194 IPR006917 -
Amo12g2162 251 SUPERFAMILY Probable bacterial effector-binding domain 4 195 IPR011256 -
Amo12g2162 251 Coils Coil 249 251 - -
Amo12g2162 251 PANTHER - 2 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2162 Amo-Chr12 99983128 99984151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2162 - - var:108347054 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2162 12 99983128 99984151 Amo12g2162 12 99983128 99984151 ECH
Amo12g2162 12 99983128 99984151 Amo02g2383 02 76428349 76429370 hybridization