Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2134 ATGCAATTCAGTGAAAAGKGAAGTGATGAGTTGTTGAAACCTTCTGAGGACATGGTATTTGGTTTGGAYCTAAGAAAGTTCAGCTCAAAACGGCATAGCAGCTTGAAGACCYCAAAAGAAAGTTCCGRGTTGCCCCAAACAAGTCGAATTCCGAAGGATGAGGATAAYTTGAAATTGAAGAGCAGCATTGGTGCAGAACACCSTGATATGAYGCATAAAGCGAAGAAGGATGCAGAGTGGAAGATTGAGAATCGAGGGAGCTTTAAGAGAAATGCAACTGATAGCGATGAGCTTGTCAAGCACATGTCGAATTTGCCAGGTTATCTCCTGCAACCTGATAGAGGACACAAGTCCCAGGAGAAGGCCTTCAATGTTGGRGTTCTAGATTGGTCTCGGCTCGAGAAATGGAACCACAACCACAACCATATCCCAGTTCTGTCTAGCAACTTTGCAGCATTCAGTAGCAGTGAATCATCATCAAGAGCAGTTACAAAATTGTCTACTAGYAGTGTCAGTTTCAGGGAAAAAAATGATGAGAAAAAGGGTTTGGCTTCTTCCTCAAGAACCAGGCCATCTAAAAAGAATAGGGAATGCCTTCCGGGAAATTCTAAACTTCTCTTTCCGGATGGCCGACAATCTGGATCTTCTAGAAGCAAAACTAAGTGCACTGATGAGKAGAGAATGGCACCCTTGGCATTTGAGTCCTTAAGCAAAACTCATTCAGATGTATCGCTTGAGAGGCGGAAGAGGAATGATCATAGTAAAAGAACTTTACAAGATGGAAATTCCACTTCAAATTCAAGGCGGCACCATGGGGTCTCACATGTTCCGAAAGAAATTTCTCAGCAGAATACYAACAGCTGGCAAGAGTATAGCCGCAATAAAAAGGAAAGACATCATAAGTTAAGCTCTGATATCGGACAGCCAGCAGTAATATCAAAGAACAAAGAGGTCTCTTTAAGATCTAAGAAAGTGAATTCAAGCAGCAGGGAAATTGGGAAAAAGGTGGATCAGTTGCAGCAGTCAGATTCCAACAACGGTCACAAACATTGCCATGATTTCCGGCTTTCTGAGTTAAGATCATCTTCTGATGAAAAGCGTTCAGAATCTAGCCAGAGTAGTTCGTCATATYTTTCRCTTCCTGASCAGGTTTGTGCTGAAGATGTATGTCCTGAAATCCCTCGTTCAAGTACGCTCAGTTCCGGGGTTGAGTTTACSTCTTTGGAAAGAGTTAGACGCAGCARTGGTGCTAGTCTGGATATGGATTGTTCTTCTGTTGTGTCTGAGACACCTGRTTATGCCAATAGGATTTCTAAACGTCGTTCATTAGGAGCTTACTCCGATGCTGATTTGTTTGGCACCAACCAAAGAAATCAGAGCGTTTTAAGTAATATAAAGGAACCACTGAYCCAAGAATCGGCAGAGCTGACTTCATCCAGCCGGAGGGGCAGGAATATATCCCACAGTCGCCGGTTTAGCTTCAGCTTAAGTCGGATCGGAAGAAGTTTCAGCTTCAAAGAGCCRCCTACACTTCCACGATCTAGTGCTAATTATGTTGGTGCGAAGTCTGGTCCAGTCACGCCTGAATGTTCCATTCGTTGGGATAATCCTGGCAAAGAGAAGGCAAGTAGTACCCGGACCAACCCTAGCCCCTTGCGGAGGTTATTAGARCCTATACTGAGGCACAAGGCATCAAGTATACACCATTCTGCTGAAAGCAGTCAGACACAAAAGGGAAGCATGAATTCAGTTAGCTTCGCGGCATTAAGAGTTGATGAACTACAGCCTTCTGAAAGAAGCAAGGGATCAATGGTTCYTGGCCTTTTGCAGCTTACAATGAAAAATGGACTACCTCTGTTTAAATTTGTGCTCAACAATGAGAAAAATATTTTTGCTGCTACCAGGAGAAGTTTGTCACCACTGGAGAAGGATGSTTGGGACYCATATTTTACATTCTACCTRGTCAATGAAATCAAGAAAAAGAGCGTTGGATGGATGAGTCATGGTAGCAAAGGAAAAAGCTCCGGTTATGCCTACAATTGCATTGCTCAGATGAAGTTTTCCAGCTCTAAAATCACCAAGCCAATCGATCAGAACTCTYACAGGCAGCGAATGGTTAAAGAATATGTCCTCATCGCCCAGACGGAACATGGACAGCCYAAGCTCGTTCAGAGCAGCGAGATTGCGGCCGTTGTCATTGAGACACCTTGGGAAAACACGAGCAATGAAGCAATGCATAGTGATACTGATTTGCTGAAYCATGGATGCTTAAGGTGCTTGTCCAATGAAAGATGCTTGTGCAGCAGTTCAGGAGAAAATGACGTGTGTACCACCAAAGTTATACTCCCAGGTGGTGTTCATGGATCACCAAACAAAGGTGAACCGTCACCATTGATATTTCGGTGGAGAACTGGTGGTTCATGTGATTGTGGGGGTTGGGACATTGGTTGCAAACTGCTRGTCCTCTCTAACCAGAAGCAGCAAAGTTCAGACGTTCCGAAATTTCCAAAACCTTTCCATGACCGTTTTCAACTTTATGCCGAGGAAGGAGATAAGCAAGACACACCCATTTTCGCCTTGTCACCGTTGAAGGATGGATTCTACTCGGTTGAGTTCCATTCATCAGTCACTTATTTACAGGCATTCTTCATCGCTGTCGCCGTTTTGAGCTGCCAGAAATTTCCAAGCTTTTTGGAAATGGGTAGCATGCTTGAAGATAACCTTAAGGAACCTAGTTCCAAGAACAACAACAGGCCTCAAGGAAAAGCACCCTTAAAGTACACTCCAATTCCACCACTCTCTCCTGTAGGAAGAGTTTGA 2820 0.4355 MQFSEKXSDELLKPSEDMVFGLDLRKFSSKRHSSLKTXKESSXLPQTSRIPKDEDNLKLKSSIGAEHXDMXHKAKKDAEWKIENRGSFKRNATDSDELVKHMSNLPGYLLQPDRGHKSQEKAFNVGVLDWSRLEKWNHNHNHIPVLSSNFAAFSSSESSSRAVTKLSTSSVSFREKNDEKKGLASSSRTRPSKKNRECLPGNSKLLFPDGRQSGSSRSKTKCTDEXRMAPLAFESLSKTHSDVSLERRKRNDHSKRTLQDGNSTSNSRRHHGVSHVPKEISQQNTNSWQEYSRNKKERHHKLSSDIGQPAVISKNKEVSLRSKKVNSSSREIGKKVDQLQQSDSNNGHKHCHDFRLSELRSSSDEKRSESSQSSSSYXSLPXQVCAEDVCPEIPRSSTLSSGVEFTSLERVRRSXGASLDMDCSSVVSETPXYANRISKRRSLGAYSDADLFGTNQRNQSVLSNIKEPLXQESAELTSSSRRGRNISHSRRFSFSLSRIGRSFSFKEPPTLPRSSANYVGAKSGPVTPECSIRWDNPGKEKASSTRTNPSPLRRLLEPILRHKASSIHHSAESSQTQKGSMNSVSFAALRVDELQPSERSKGSMVXGLLQLTMKNGLPLFKFVLNNEKNIFAATRRSLSPLEKDXWDXYFTFYLVNEIKKKSVGWMSHGSKGKSSGYAYNCIAQMKFSSSKITKPIDQNSXRQRMVKEYVLIAQTEHGQPKLVQSSEIAAVVIETPWENTSNEAMHSDTDLLNHGCLRCLSNERCLCSSSGENDVCTTKVILPGGVHGSPNKGEPSPLIFRWRTGGSCDCGGWDIGCKLLVLSNQKQQSSDVPKFPKPFHDRFQLYAEEGDKQDTPIFALSPLKDGFYSVEFHSSVTYLQAFFIAVAVLSCQKFPSFLEMGSMLEDNLKEPSSKNNNRPQGKAPLKYTPIPPLSPVGRV* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2134 939 MobiDBLite consensus disorder prediction 177 197 - -
Amo12g2134 939 MobiDBLite consensus disorder prediction 177 378 - -
Amo12g2134 939 Pfam Domain of unknown function (DUF3527) 719 891 IPR021916 -
Amo12g2134 939 Pfam Domain of unknown function (DUF3527) 604 717 IPR021916 -
Amo12g2134 939 MobiDBLite consensus disorder prediction 529 553 - -
Amo12g2134 939 PANTHER EXPRESSED PROTEIN 346 939 - -
Amo12g2134 939 PANTHER EXPRESSED PROTEIN 23 355 - -
Amo12g2134 939 MobiDBLite consensus disorder prediction 31 57 - -
Amo12g2134 939 MobiDBLite consensus disorder prediction 317 331 - -
Amo12g2134 939 PANTHER DUF3527 DOMAIN PROTEIN 346 939 - -
Amo12g2134 939 PANTHER DUF3527 DOMAIN PROTEIN 23 355 - -
Amo12g2134 939 MobiDBLite consensus disorder prediction 908 922 - -
Amo12g2134 939 MobiDBLite consensus disorder prediction 907 939 - -
Amo12g2134 939 MobiDBLite consensus disorder prediction 240 257 - -
Amo12g2134 939 MobiDBLite consensus disorder prediction 346 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2134 Amo-Chr12 99189456 99195578 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2134 - - ahf:112727854 1769.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2134 12 99189456 99195578 Amo12g2134 12 99189456 99195578 ECH
Amo14g2460 14 99876558 99879822 Amo12g2134 12 99189456 99195578 PCT