Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2132 ATGGAAGAACACAACACAATAACAAAAAGGAACAACGTTGTTTCTTCTTCTTCTTCATCTATGTTGGTATTGATTATTTGTTCTGTTTTGATACATTGGAGCATTGTTCATACTCCACAAGCTGAAGCAGCAAGAGCGTTCTTCGTTTTCGGGGATTCGCTTGTTGACAATGGCAACAACAACTTCTTAGCAACCACAGCTCGTGCTGACTCATACCCTTATGGCATTGACTCTCCTTCTCATAGAGCCTCTGGTCGTTTCTCCAATGGCCTCAACATGCCTGATCTTATCAGTGAGAAAATAGGGTCTGAACCCACATTGCCATATTTGAGTCCGGAGCTTGATGGAGAGAGGTTACTTATTGGTGCCAACTTTGCTTCAGCTGGGATAGGAATTCTCAATGACACTGGAATCCAGTTTATAAACATAATACGAATTAGAGAGCAATTAGAGTACTTTAAGCAGTATCAAAGAAGGGTGGCAGCACTAATTGGAGAGCAAGAAACTWAAGATTTAGTGAACCAAGCATTGGTGCTTATAACATTAGGGGGCAATGATTTTGTGAACAACTATTACTTGGTTCCTTTCTCTGCAAGATCTCGAGAATTTGCTCTTCCTGATTACGTTGTCTTCCTCATTTCTGAGTATCGCAAAATTCTTMAGAGCCTGTATGAATTGGGAGCAAGAAGAGTTCTGGTGACAGGAACAGGGCCATTAGGATGTGTTCCTGCAGAATTGGCCCTTCACAGTAGAAATGGAGAATGTGCGGTTCAGCTTCAAGCCGCTGTTAACTTGTTCAACCCTCAATTGGTCCAATTGATCAACCAACTCAACTCTCAAATTGGATCCAATGTTTTTATTTCTGCAAATGCCTTCACTATGCACTTGGATTTCGTTAATAATCCACAGGAATACGGATTTGTAACATCAAAAGTAGCATGTTGTGGTCAAGGAGCATACAATGGAATAGGGCTATGCACACCAGCTTCAAACTTGTGTCCAAACAGAGACCTCTTTGCATTTTGGGATCCCTTCCATCCCTCSGAGAAAGCTAATAGATTGATCGTAGACAAATTCATGACTGGATCCACTGAATACATGAGCCCCATGAACCTTAGCACAATTATGGAGTTAGATTCTAGGATCTAA 1149 0.4117 MEEHNTITKRNNVVSSSSSSMLVLIICSVLIHWSIVHTPQAEAARAFFVFGDSLVDNGNNNFLATTARADSYPYGIDSPSHRASGRFSNGLNMPDLISEKIGSEPTLPYLSPELDGERLLIGANFASAGIGILNDTGIQFINIIRIREQLEYFKQYQRRVAALIGEQETXDLVNQALVLITLGGNDFVNNYYLVPFSARSREFALPDYVVFLISEYRKILXSLYELGARRVLVTGTGPLGCVPAELALHSRNGECAVQLQAAVNLFNPQLVQLINQLNSQIGSNVFISANAFTMHLDFVNNPQEYGFVTSKVACCGQGAYNGIGLCTPASNLCPNRDLFAFWDPFHPSEKANRLIVDKFMTGSTEYMSPMNLSTIMELDSRI* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2132 382 CDD SGNH_plant_lipase_like 46 363 IPR035669 -
Amo12g2132 382 Gene3D SGNH hydrolase 33 364 IPR036514 -
Amo12g2132 382 Pfam GDSL-like Lipase/Acylhydrolase 48 358 IPR001087 GO:0016788
Amo12g2132 382 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 17 378 - -
Amo12g2132 382 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 17 378 - -
Amo12g2132 382 SUPERFAMILY SGNH hydrolase 47 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2132 Amo-Chr12 99153164 99160832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2132 39 377 Acyl Lipid Metabolism Gene Families AT4G10950 32.845 7.37e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2132 - - gmx:100816078 640.188