Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2106 ATGGAGGGTCACACTAAGATGATGTTCATTCTTGGCCTTGTGGCCATTGCTAGCATCTCACAGATTTATAGAGTGGAAGGTGCTGGGGAATGTGGGAAAAACACTACCCCAGACAATGAGGCTATTAAGCTAGCACCTTGCGCCACAGCGGCGCAAGATGAGAATGCGAGCGTGTCGCAGAGTTGCTGTGTTCAGGTCAAGAAATTTGGCCAGAATCCAGCTTGCCTCTGCGCTGTTTTGCTCTCTAACACGGCCAAGATGTCCGGCGTTGACCCTAAGATTGCCATCACCATCCCCAAGCGTTGCAACTTTGCCAACCGCCCCGTTGGTTACAAGTGTGGACCTTACACTCTACCATAA 360 0.5083 MEGHTKMMFILGLVAIASISQIYRVEGAGECGKNTTPDNEAIKLAPCATAAQDENASVSQSCCVQVKKFGQNPACLCAVLLSNTAKMSGVDPKIAITIPKRCNFANRPVGYKCGPYTLP* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2106 119 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 40 108 IPR036312 -
Amo12g2106 119 Pfam Probable lipid transfer 38 109 IPR016140 -
Amo12g2106 119 Gene3D - 30 109 IPR036312 -
Amo12g2106 119 PANTHER LIPID BINDING PROTEIN-RELATED 5 119 IPR039265 GO:0005504|GO:0009627
Amo12g2106 119 PANTHER LIPID TRANSFER PROTEIN 5 119 - -
Amo12g2106 119 CDD AAI_LTSS 44 103 - -
Amo12g2106 119 SMART aai_6 31 113 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2106 Amo-Chr12 98575799 98577059 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g2106 25 119 Acyl Lipid Metabolism Gene Families AT3G53980 73.684 4.62e-50 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2106 - - aprc:113860629 194.897