Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2071 ATGGTTATGGTATTGTCAAGGCGACACAAAATCTTGCCGGCAGAATCAAAGGTGAGAACATTGGAAATTCTCGCCTTTGATATCGGCAAAACCATGTGCCGCCTTGTCTGCCTCTATCACTCCCTCTCGGACGGTGAAATCACTCGCCTCCGCGGCCAGACCACTAAATCCAAGGGAGTGGCGTACCTCACGTCTCACCAGGAATGCTTCCTCCTCAACCTCGCGGCAGCGGAGCTCCTCGAGGATCTCGACGCTGCCGCCATCACCGTGTCCCAGCTTGGCCGGAAGTGCTCCGACGTTTCCCTCTCCCGCTTCGACCTCGTCTATAACGACCTCAAGCTTGGCGTCATCGATCTCAGGAAGCTTGGTTACGCCACACGGAGCGCCAATAARGTTATCGGGAAGATGGAGAAGCTCGTTGCCACCACCGGAAACCTCCAYSCAGCCTTGGAAACCATGGCGGAGTTGGAAGCYTCCGAGAAGAAGATGCAGCGTTGTAATAACAACTACAACTACAACTACAGCAACAACTTTCCAAAACCCAATGTCGATTACTTGAAAGAAAAGATTGAATTTCAGAGGAAGCAAGTGCAGCACTATAAGGAGGTTTCGTTGTGGAACCAAACATTTGATAAAACCGTTGGGATCATGGCCAAGGTTGTGTGCATTGTTTATGCAAGAATATGCTCCGTTTTTGGAGAATGCATTTCATTGTTTTCAGACAAGAACAACGACAAGGACAACCTCGACAACAGCGTTTATTGCCTCTTAGAACACCGTGTGTTGTACCAGAACAATCTTTGTCTCTCCGATCATCACCAGCGTGGTAATTACAAAACAAAATCTGGTCCCCTCTTCTCTAAAACCAACAAATTGTATCCCGTAAATTTTTATAGCGGTGCTTTAAAACCTGACAGGATACAATTTGATGCCAAGAGTATCAGCAACGAAAAATGTGGTAATGTTTTAAAGTTGGCCCCATCAAACACAGTTGGTGGAGCCAGGTTGGCTTTTAAGTATGCCAATGTGATATTATTTGCAGAACGTTGTTTCAATGCCCCGCCAAAGGGGGCACGTGAGACACTGTATGAGATGCTGCCAGAGAGGTTGCGAGTGAAGGTGAGGGCGAAACTGAAAGCAAGGTGGAGAAAGGGAGAGAACGGAATGGAGGAGTGTGATGCCTTGGCAGACGGGTGGCGGGAGGCGGTGGAGGAGCTTTTGGATTGGCTTTTGCCGGTGGCGCATGACACGGTCCGGTGGCACAGCGAGAGGCTCTTGGAGAAGAAGCCGTTTGAGGTGAGGGCGAGGGTGTTGCTTTTGCAAACACTACATTACTCTGACTTGGAGAAGGTGGAGGCAGCCATAGTGGAGGTGCTAGTAGGGTTGAGTTATATATATTTGTATGAGAAACGGTTGTAG 1419 0.4877 MVMVLSRRHKILPAESKVRTLEILAFDIGKTMCRLVCLYHSLSDGEITRLRGQTTKSKGVAYLTSHQECFLLNLAAAELLEDLDAAAITVSQLGRKCSDVSLSRFDLVYNDLKLGVIDLRKLGYATRSANKVIGKMEKLVATTGNLHXALETMAELEASEKKMQRCNNNYNYNYSNNFPKPNVDYLKEKIEFQRKQVQHYKEVSLWNQTFDKTVGIMAKVVCIVYARICSVFGECISLFSDKNNDKDNLDNSVYCLLEHRVLYQNNLCLSDHHQRGNYKTKSGPLFSKTNKLYPVNFYSGALKPDRIQFDAKSISNEKCGNVLKLAPSNTVGGARLAFKYANVILFAERCFNAPPKGARETLYEMLPERLRVKVRAKLKARWRKGENGMEECDALADGWREAVEELLDWLLPVAHDTVRWHSERLLEKKPFEVRARVLLLQTLHYSDLEKVEAAIVEVLVGLSYIYLYEKRL* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2071 472 Pfam Protein of unknown function (DUF668) 330 419 IPR007700 GO:0045927
Amo12g2071 472 PANTHER OS10G0380300 PROTEIN 14 471 - -
Amo12g2071 472 PANTHER BNAC09G50660D PROTEIN 14 471 - -
Amo12g2071 472 Coils Coil 149 169 - -
Amo12g2071 472 Pfam Domain of unknown function (DUF3475) 23 79 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2071 Amo-Chr12 96918929 96920729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2071 - - gmx:100796635 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2071 12 96918929 96920729 Amo02g2261 02 73964425 73966156 hybridization