Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2066 ATGATGAAGCGGATGGTGGGTGGGCCAGGTACGAGGAGTGGGTTCTTCTTGAGATTAGGGCAATGTGCGTTTGGTTGTGCTTCAATTGGCCTAATGGTCACAGCAGCTGAATTTTCTAACTTCACTGCTTTCTGCTATTTAATTGCATCAATGGGACTTCAAGTTCTCTGGAGCTTTGGACTTGCATGTCTTGATATCTATGCCTTGAGGAGAAAAAGAGACCTACAAAACCAATTCTTGTCAGCCTGTTTGTTGTTGGTAACAGCTACTTTGTCGCTAGCAGCTGCTTGCTCATCTGCGGGAATCATAGTTTTATATGCAAAAGACCTGGATTTCTGCAAGAAGCACAAGAGTATTCCATGCCACAGGTACCAGGTTTCTGTAGCCATGGCATTTATCACGTGGTTTTTTACAGCAATGTCATCACATGTGATGTTTTGGATCTTAGCATCAGTCTAG 459 0.4357 MMKRMVGGPGTRSGFFLRLGQCAFGCASIGLMVTAAEFSNFTAFCYLIASMGLQVLWSFGLACLDIYALRRKRDLQNQFLSACLLLVTATLSLAAACSSAGIIVLYAKDLDFCKKHKSIPCHRYQVSVAMAFITWFFTAMSSHVMFWILASV* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2066 152 PANTHER CASP-LIKE PROTEIN 5B3 2 152 IPR045009 -
Amo12g2066 152 Pfam Casparian strip membrane protein domain 9 137 IPR006702 -
Amo12g2066 152 PANTHER CASP-LIKE PROTEIN 2 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2066 Amo-Chr12 96780297 96784308 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2066 - - ccaj:109817576 219.164