Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2064 ATGGCGGAGGAAATTAGATTCTTCGAGCTGAACACAGGTGCCAAGATACCTTCTGTTGGATTAGGAACTTTTCAGGCTGAAAATCCTGGAGCCTTGGCCAAAGCAGTTACCACCGCTATCAAGGTTGGATACAGACATATCGATTGTGCTTCATCTTACGGCAATCAAGCAGAGATTGGTTCTGCTCTCAAGAAGCTTTTTGATGAAGGTGTTGTAAAGCGTGAAGAAGTATGGATCACCTCAAAACTATGGTGCACAGATCATGATCCTGAAGATGTACCAAAAGCATTAGATAAAACGTTACAAGAGTTGCAACTTGACTATGTAGATCTCTATCTGATTCACTGGCCAGTCAAAATGAAAAAGGGATCAGTTGGAATCAAGCCTGAATATCTTACGATACCAAACATCCCCAATACATGGAGAGCGATGGAGGCGATGTACGACTCTGGCAAGGCTAGAGCTATCGGGGTGAGTAATTTCTCTTCAAAGAAGCTTCAAGATCTGTTGGATATAGCGCGTGTTCCTCCTGCAGTTAATCAAGTGGAGTTGCATCCGCAATGGCAGCAGCCAAAGTTGCATGAATTCTGTAAATCCAAAGGAATTCACCTATCTGGATATTCTCCACTAGGTTCTCAATTTAACGGTCACAAGAATAACCTCCTTAAGAATCCTGTGCTTAATGTGGTTGCGGATAAGTTAGGGAAGACACCGGCACAAGTGGCCCTCAGGTGGGGTCTGCAAGCAGGGCATAGTGTACTGCCAAAGAGTGCTAACGACGAGAGGATCAAGAGCAACTTTGATGTCTTTGACTGGTCTATCCCTGACGATCTAATGGCCAAGTTTTCTGAAATTAAGCAGGAGAGGGTTATTGATGGTACTGGATTATTTGTGCATGAAACTTATGGTGCATATAAGACTCCTGCAGAACTCTGGGATGGAGAATAG 948 0.4388 MAEEIRFFELNTGAKIPSVGLGTFQAENPGALAKAVTTAIKVGYRHIDCASSYGNQAEIGSALKKLFDEGVVKREEVWITSKLWCTDHDPEDVPKALDKTLQELQLDYVDLYLIHWPVKMKKGSVGIKPEYLTIPNIPNTWRAMEAMYDSGKARAIGVSNFSSKKLQDLLDIARVPPAVNQVELHPQWQQPKLHEFCKSKGIHLSGYSPLGSQFNGHKNNLLKNPVLNVVADKLGKTPAQVALRWGLQAGHSVLPKSANDERIKSNFDVFDWSIPDDLMAKFSEIKQERVIDGTGLFVHETYGAYKTPAELWDGE* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2064 315 PRINTS Aldo-keto reductase signature 39 63 IPR020471 GO:0016491
Amo12g2064 315 PRINTS Aldo-keto reductase signature 99 117 IPR020471 GO:0016491
Amo12g2064 315 PRINTS Aldo-keto reductase signature 144 161 IPR020471 GO:0016491
Amo12g2064 315 PRINTS Aldo-keto reductase signature 178 207 IPR020471 GO:0016491
Amo12g2064 315 PRINTS Aldo-keto reductase signature 221 245 IPR020471 GO:0016491
Amo12g2064 315 Pfam Aldo/keto reductase family 20 285 IPR023210 -
Amo12g2064 315 ProSitePatterns Aldo/keto reductase family signature 2. 144 161 IPR018170 GO:0016491
Amo12g2064 315 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 2 314 - -
Amo12g2064 315 ProSitePatterns Aldo/keto reductase family signature 1. 43 60 IPR018170 GO:0016491
Amo12g2064 315 Gene3D - 4 315 IPR036812 -
Amo12g2064 315 PIRSF AKR 1 307 IPR020471 GO:0016491
Amo12g2064 315 SUPERFAMILY NAD(P)-linked oxidoreductase 8 287 IPR036812 -
Amo12g2064 315 ProSitePatterns Aldo/keto reductase family putative active site signature. 254 269 IPR018170 GO:0016491
Amo12g2064 315 PANTHER ALDO/KETO REDUCTASE 2 314 - -
Amo12g2064 315 CDD AKR_AKR4C1-15 6 291 IPR044498 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2064 Amo-Chr12 96738697 96741858 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2064 K00002 - gmx:100801791 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2064 12 96738697 96741858 Amo12g2064 12 96738697 96741858 ECH
Amo12g2064 12 96738697 96741858 Amo02g2255 02 73702263 73705740 hybridization