Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g2058 ATGAACACAAAAATGGGTGAAGAAGAAGATCTTCGGTTCTTCGAGTTGAATACAGGGGCTAAGATACCTTCAATTGGCTTGGGAACTTGGCGTGTTGGATCTGCTGACATTGCTCATACTTTAGCCACTGCTATCAAGGTTGGGTATCGACATATAGATTGTGCTCATATTTATGGAAATGAAAAGGAGATTGGAGATGCCTTGAAGGAGTTGTTCGCCAATGGGGTTGTTAAGCGTGATGAAATGTGGATCACTTCAAAGTTGTGGTGCACTGATCACTCGCCAGAAGATGTCCCAAAGGCATTGGATAGAACTTTGCGGAATTTGCAACTAGACTATCTGGATCTCTACCTTATTCACTGGCCAGTCAGCATAAAAAACGGGGTGTGTACTAAACCGGACATACCAAGCACATGGAGAGCAATGGAGGAACTCTACAATTCCAGGAAGGCCCGAGCTATTGGGGTAAGCAATTTCACTGTAAAGAAGCTTCAGGATCTATTGGAGGTTGCGCAAGTTCCTCCGGCGGTTAACCAAGTGGAATTGCATCCTTCATTGCAGCAACCAAAGTTGCATGAATTCTGTAACTCCAAGGGAGTGCACTTATCTGTGGAATATGAGATAGGAATCTTCCATGATTCTGAGCTGTCACTCTTTACTAACAACTATTTATCTTTATTCAGGGTTATTCGCCAGCTTGGTAAAGGACTAAGTAGGACTAATATTCTTATGGATCCAGTTCTTCACACTGTTGCAGAGAAGCTGGGGAAGACACCAGCACAAATAGCTCTTAGGTGGGGTTTACAGATGGGAAACAGTGTACTTCCCAAGAGCACAAGTGCTACCAGAATCAAAGAGAACTTTGATTTGTTTGATTGGTCTATACCTGAGGATTTGCTGGCCAAGTTCTCTAAAATTAAGCAGGAGAGAGTGGTTGCTGGTGAAGAATTTATTAGCGAAATACCTGATGGGTACAAAACAATTGAAGATCTCTGGGATGGTGAGTAA 1008 0.4296 MNTKMGEEEDLRFFELNTGAKIPSIGLGTWRVGSADIAHTLATAIKVGYRHIDCAHIYGNEKEIGDALKELFANGVVKRDEMWITSKLWCTDHSPEDVPKALDRTLRNLQLDYLDLYLIHWPVSIKNGVCTKPDIPSTWRAMEELYNSRKARAIGVSNFTVKKLQDLLEVAQVPPAVNQVELHPSLQQPKLHEFCNSKGVHLSVEYEIGIFHDSELSLFTNNYLSLFRVIRQLGKGLSRTNILMDPVLHTVAEKLGKTPAQIALRWGLQMGNSVLPKSTSATRIKENFDLFDWSIPEDLLAKFSKIKQERVVAGEEFISEIPDGYKTIEDLWDGE* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g2058 335 Pfam Aldo/keto reductase family 25 306 IPR023210 -
Amo12g2058 335 ProSitePatterns Aldo/keto reductase family signature 2. 142 159 IPR018170 GO:0016491
Amo12g2058 335 SUPERFAMILY NAD(P)-linked oxidoreductase 14 309 IPR036812 -
Amo12g2058 335 ProSitePatterns Aldo/keto reductase family putative active site signature. 275 290 IPR018170 GO:0016491
Amo12g2058 335 PIRSF AKR 7 330 IPR020471 GO:0016491
Amo12g2058 335 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 232 334 - -
Amo12g2058 335 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 10 210 - -
Amo12g2058 335 Gene3D - 11 335 IPR036812 -
Amo12g2058 335 ProSitePatterns Aldo/keto reductase family signature 1. 48 65 IPR018170 GO:0016491
Amo12g2058 335 PANTHER ALDO/KETO REDUCTASE 10 210 - -
Amo12g2058 335 PRINTS Aldo-keto reductase signature 44 68 IPR020471 GO:0016491
Amo12g2058 335 PRINTS Aldo-keto reductase signature 142 159 IPR020471 GO:0016491
Amo12g2058 335 PRINTS Aldo-keto reductase signature 104 122 IPR020471 GO:0016491
Amo12g2058 335 PRINTS Aldo-keto reductase signature 176 205 IPR020471 GO:0016491
Amo12g2058 335 PANTHER ALDO/KETO REDUCTASE 232 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g2058 Amo-Chr12 96588155 96592614 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g2058 K00002 - gmx:100809492 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g2058 12 96588155 96592614 Amo02g2235 02 73261497 73264687 hybridization