Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0532 ATGTCGATCAGCTTTATACCTGGCTTTTTGCAAGAACGTGCAATCGATGCAGCAACTGCTTACGTAACAACGCAACTAGGCTACGTGTGGGATTACGAGAAAAGATTCGTCGATGTAAGCAAAGCTGTCGAGGCTCTCAAGAATGATAGGGATGGAGTGCGTGATAAAGCCGAAGAAGATGAAGGACGGTATGGGAGAGCTATATATGATAATGTTGTAGAATGGTTGGCTCGTGTCGATGGAATTCTTGCTAAATATGAAAAATTCAAACAAGAACATGATAATAATGCAGGCTATGCACTTGCTTTTCCATTTCAAAATCTAGACATAAGATATCATCGCAGCAAAACAGCAGAAGATATCAAAGAAAGGGTTGAAGAATTGCAAAATGAGAAGCATGATAGTATATCTCGCTGGCAGGGCCCACCTTCTTCCATGGGTTATGCGCTTCCTTCTGTTGAATATGAAGAACTTGATTCAAGAAAACAAAATATGGAAGATGTTAAAAAAGCCTTGGAAGATTCGAGTGCTACAATGGTTGGTATTCACGGCCTAGCTGGTATGGGAAAGACTACTTTGGTCATAAAAGCTATTAACACACTTCAAAGTCGAGAACCTAAGTTATTTGATATGGTGATTATGGCAAATGTGGGCAAAAATCCAGACATCAGAAAAATTCAAGGCCAGATTGCTGACATGCTCGGAATAACATTGCAAGAGGAGAGTGAGTATGCGAGAGCTATTCGCATAAGAGAGAAATTGAAGAAAGAAAAAAACACTCTTATAATCCTTGATGATATGTATACAAAAGTGGACTTGGATATGTTGGGAATTCCATCACAGAATGAAGATGACAAAAAGAATCTCGTTCTCAAACAAAGAATAAGATCTTCTAATCCCTCTGGAGCAACTCTAACTAAGCCAGAGACAGAGAATTTTGTTGGTGGTAGACAAAATTTGACAAGATTAAAGTCAGGAATAGATGCTAACAGGACGAGAACAGAGAAAAAAATTGAAGACACCTCTAATGGTTCTAGTAAAGTAAGAAAAGCATCAGAAGAGAATAAAAAAGGATGCAAGGTTTTGTTAATTTCTGAGGCAAAACGAGTATTGAACCAGATGGATGTAAATGCAAATTCAATTATCTCTTTAGATATCATAAACCCTGACGATGCCAAAATATTGTTCAAAAAAAAGGTGGGAATAACAGATGAGAAAAATTCTGATCTTGAACGGCTAGCCATTGACATTGCCAAGAAGTGTCACGGGTTGCCCATGTCAATAGTTACAACTGCAAAGGCATTGAAAAATCAAAGCCGCTATGTTTGGCAGGAGACCCTTAACACACTTGAAAGACAAAAGCTTGCAGGAACACCTGAGTATTCTACAAAGTTGAGTTATGAGCTTTTAGCAAATGAGGAGCTCAAGCTTATCTTTTTGCTTTGTGCTTGTATGGATCAAGATGCATTGGTCTCAGACTTAGTGAGACTATGCATTGGTTTGGGTTTTCTTGAAGGCGTCTACACAGCAAAGGAAGCCAGAGATCAAGTGCAAATGTTGCTTATTCATTTAAAAGAGTCAGGTTTGTTGTCTGACAGTTACTCAAATGATCGTTTCACAATGCAAAACCTTGTTCGCAAGGCAGCTTTGTTGATAGCATCAGAGAATAATGTGTTCGTGCTGGCAAAAAGAAAGCTAGATGAATGGCCTGATGATGATAAACTTGAAAGTCAACATTTCGAAATACCAAATGACTTTTTCCGAGAAATGAAAGAACTTAGAGTGTTGGTTCTGCTTGGCATTGATCTCTCCAAAATGTCTTCATCAATGAAATGCCTAAGAAAACTCCGAAAGCTTTGTTTGGAGCAATGCATTAACCTAGATGAGGAATTATGCAACAGTATTGGCACGTTCATGAAGAATCTAAGAATTCTAAGCTTTTCTGGATCTGATATTAAAAGCTTGCCTACTAAATTGAAGGGTTTGTCAAAGCTGCAAATTCTTGACTTAAGTAATTGCTCCCAACTAAAATCAATTCAAGCTGGTGTAATATCTAGCTTGACAAGTTTGGAGGAGTTGTACATGAGAAACACTTTGGTTGAATGGAGGATGGATAATAGAGAGGAAACTGAAAACAAAAATGCTAGTCTTTCGGAGTTGGGACATCTAACTCAAATAACAAATGTTGACTTTCAAATCCCAAGTGTTGCCCATTTGCCAGAAAACTTATTCTTTGATAAGCTGCATAGCTACAAAATTGTAATTGGCTCGTCAAGTACATTTTTGGAGCCAGATTTCAAGATTCCGGAGAAATATCAACTGTTGAGGTATTTGGCAATACTGGAGAAAGATGTTGGCATTCATTCTCAGAAAGGGATCAAAATGTTGTTTGAAAGAGTTGAGAATTTGTTGCTGGAAGAACTCAACGGTGTCCAAGACATCTTTTATGCACTGAATTTGAAAGGGTTTCCATGTCTTAAGACTTTGTCCATTGTGAGTACTCTTAGCATTCGATATTTGATCAACCCACAGGAGAGGAAGCATCCTGAGAATGCTTTTCCGAAACTGGAGACATTGCACCTCTACAAGCTCGATAACATGGAGCAACTATGCTCTCGTGTGTCACTTTCATCCTCCTCATTTTGTAAACTAAAAGTTGTCAAGATTAAGCTTTGTGGTTTATTAAAGAATGTCTTTGTAATGTCTATGGTCAAGCTTTTGGTTGCTCTTCAAACAATTGAAATTTTAGAATGTAATTCTCTAAAGGAGATTGTCTTTGTGGAAGATACACAAGATTCTAACACGTCGAAGCCTCTTAAGTTTCAAGAATTACGCACTTTGACATTAAAATCATTACCTGAGTTTCATGGATTCTGTTCCATTTCATCTACAGCGCAACAAAAAGTATTGTTCGATGAGCAGGTTGAATTCTCAAAATTAGAGAGATTGCAGTTGTCCTCTATCCAAATCCACCAAATATGGAATGGCAAAAATCCTCCTTTTGGAAAATTGGTACACTTGGAAGTGAATGGTTGCGGTAATTTAAAAAGTTTGTTAACATTGTCTATGGCTATAAATATGAAGACTCTCCAAAGCCTATCTGTCAGCGAGTGTGACAAAATGGGGCAGATTCTTCTCAACGAGAACAGCAATGATATTGAAAGTGAAAAGAAGACAACAAGCTCAGAATGA 3192 0.3781 MSISFIPGFLQERAIDAATAYVTTQLGYVWDYEKRFVDVSKAVEALKNDRDGVRDKAEEDEGRYGRAIYDNVVEWLARVDGILAKYEKFKQEHDNNAGYALAFPFQNLDIRYHRSKTAEDIKERVEELQNEKHDSISRWQGPPSSMGYALPSVEYEELDSRKQNMEDVKKALEDSSATMVGIHGLAGMGKTTLVIKAINTLQSREPKLFDMVIMANVGKNPDIRKIQGQIADMLGITLQEESEYARAIRIREKLKKEKNTLIILDDMYTKVDLDMLGIPSQNEDDKKNLVLKQRIRSSNPSGATLTKPETENFVGGRQNLTRLKSGIDANRTRTEKKIEDTSNGSSKVRKASEENKKGCKVLLISEAKRVLNQMDVNANSIISLDIINPDDAKILFKKKVGITDEKNSDLERLAIDIAKKCHGLPMSIVTTAKALKNQSRYVWQETLNTLERQKLAGTPEYSTKLSYELLANEELKLIFLLCACMDQDALVSDLVRLCIGLGFLEGVYTAKEARDQVQMLLIHLKESGLLSDSYSNDRFTMQNLVRKAALLIASENNVFVLAKRKLDEWPDDDKLESQHFEIPNDFFREMKELRVLVLLGIDLSKMSSSMKCLRKLRKLCLEQCINLDEELCNSIGTFMKNLRILSFSGSDIKSLPTKLKGLSKLQILDLSNCSQLKSIQAGVISSLTSLEELYMRNTLVEWRMDNREETENKNASLSELGHLTQITNVDFQIPSVAHLPENLFFDKLHSYKIVIGSSSTFLEPDFKIPEKYQLLRYLAILEKDVGIHSQKGIKMLFERVENLLLEELNGVQDIFYALNLKGFPCLKTLSIVSTLSIRYLINPQERKHPENAFPKLETLHLYKLDNMEQLCSRVSLSSSSFCKLKVVKIKLCGLLKNVFVMSMVKLLVALQTIEILECNSLKEIVFVEDTQDSNTSKPLKFQELRTLTLKSLPEFHGFCSISSTAQQKVLFDEQVEFSKLERLQLSSIQIHQIWNGKNPPFGKLVHLEVNGCGNLKSLLTLSMAINMKTLQSLSVSECDKMGQILLNENSNDIESEKKTTSSE* 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0532 1063 PANTHER - 12 576 - -
Amo12g0532 1063 PANTHER - 603 1056 - -
Amo12g0532 1063 SUPERFAMILY RNI-like 584 916 - -
Amo12g0532 1063 Coils Coil 43 63 - -
Amo12g0532 1063 Coils Coil 118 138 - -
Amo12g0532 1063 Gene3D - 387 470 IPR042197 -
Amo12g0532 1063 Gene3D - 149 298 IPR027417 -
Amo12g0532 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 482 IPR027417 -
Amo12g0532 1063 Coils Coil 155 175 - -
Amo12g0532 1063 PRINTS Disease resistance protein signature 421 435 - -
Amo12g0532 1063 PRINTS Disease resistance protein signature 254 268 - -
Amo12g0532 1063 PRINTS Disease resistance protein signature 179 194 - -
Amo12g0532 1063 PRINTS Disease resistance protein signature 660 676 - -
Amo12g0532 1063 PANTHER RPP4C4 12 576 - -
Amo12g0532 1063 PANTHER RPP4C4 603 1056 - -
Amo12g0532 1063 Pfam NB-ARC domain 348 468 IPR002182 GO:0043531
Amo12g0532 1063 Pfam NB-ARC domain 162 296 IPR002182 GO:0043531
Amo12g0532 1063 Gene3D Ribonuclease Inhibitor 574 1044 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0532 Amo-Chr12 9335603 9373371 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0532 - - aip:107628196 2031.91