Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0511 ATGTTAAGATTTCAGTGGTTTGGCCGTTTGGAAGTCATTCCACCTGGTTTAATCTCAAACCTGACTAGTTTGGAGGAATTGTACATGAGCAACATCTCCACTGAATGGGAGAGTCATGACAATGCTAGTCTTTCAGAGTTAGAGAATCTGAATCTATCAAATATTGACTTACAAATCCCAAGCGTTAAATTTTCCAAATTGGAGAAAATTGAGTTGTCCTCCATCCAAATCCACCAACTATGGATCGGCCAAAAGCCACCTTTTGCAGAATTKGTACACTTGGAAGTGAAGGGTTGTGGGAATTTGGAATTTTTATTATCATTATCTATGGCTAGAAATATGGTGAAACTACAAAGCCTTTCTATCACGGAATGTGACAAAATGAAACTCATATTTTCAAAAGATAAAGGCAGTACTGATGTTAAAAAGAAGGAAACAATCTTTCCAAATTTGAAGAATATCAAAGTGAGTAACATGAAGAGTTTGAGTGAGATATGTGACTTTGAATTCCCTGTAGATTCCTTTGTCAAGTTGGAGACAGCAGTTATTAATGAGTGTGGTAAATTGAATCATGTTTTTACTCATGACATGGTGGGAATATTTGAACATTTAAGCAGCTTAAGAGTTACTAATTGCAAGTCAATAAAAGCTATATTTAACCTGGATGGGAAAAATAAGCTTGCTGGTACTAGTAGGTATGCAACAATCAAACTACAAGATGTTCATTTACAAACACTCCCAAAATTGGAGCATTTGTTTAACTGGAAGAAAGATCGGCCGGAAGGGAACTTTAACTTGAAGAATCTACAAAAGATATGGGTTCAAGAATGTGGCAGGTTGGAAAACATATTTTCTTTTCATGTAGCCAAGACTATTGAAGATAATCTTGAATACCTTGTGGTGTCAGATTGTTCTCAATTGAGGGAAATTGTAGCTGAGGAAGAAGATGCCAATAACCCAAGTAATACTATTGAGTTCACCAAACTGGCAACAGTCAAATTTCTGAGACTACCAAAATTTAAGAGATTCTGCCGAAGAGACTATGAATTAAAGTTGCCAGCATTGAATGACTTGTCTATTGAAATTTGTGACAAGTTGGAACCACATTTCAAAMGAGACACCACAGATGCACAAAGAAAGCCTATGTATTTTTTTGAAGAGGCGCTCAATGAGTTGAAGTCCTTGCAAATTGGGTCACAGCATGCAAAGTTGTTAAGTAACTATGACTCCCGAATGGACAAATTAGAAGAGCTTCATTTTTCTCAATTGGATAGTACTGATGTCCTATATGCTTTCCTTCATAGCAATCCAAACTTGATGAGCCTTTGGTTGAATAGATGTTATTTTCAAAAATTGGTTCCTCTTGAAAGGCCTCCTAATATTGAAAGATTGGGGGTTGTTCCAAAGCTGAAAGGCTTGAATTTAATGGATTTACCATATCTTGAGGGAATCGGCTTTGAACGAGACGCGATTCTTCAGATGATTGAGTCATTGACTTTAAAGGATTGTCCACGTTTGGAGACTCTAGCACCTTCCTCTGTATGCCTCTCTCACTTGACAAAGCTGGAAGTAGTTGGCTGCAAAGGACTAAAATATTTAATATCACCATCCACGGCAAGAAGATTGGGTCAACTTAACACCATGAAGATAATCAACTGCCAATCTTTAGTGGAAATTGTGTCATGTGACAGAGAAAATTTAGGTGAGGTTGACCTCATTTTTGAACAACTGACAACTCTTGAGCTTGTGGCATTAGACAGCCTACAAAGTTTTTGTAGTTTCAAGAGTTGTTCCTTCCATTTTCCGATATTGGAGAAATTCGTGATGAATGTCTGCCCCAAGTTAGAAAATTTCTCTCAAGGAGTCAGTAACACACCGATTCTGCAAAAGGTGTATCTTGATGATGACAAAGAGAAGATGAGATGGTATTGGAAGGAGAATTTACAAGATACGATACAATATATATTCAAACACAACGATTTTTTCGAATGCATGGAGGAATTAAGTGTGATTGAACATCTTGATTATCTGGAACCATTCTGGGAAAGTAACAAAAGCCTACAAGAAGACTTGTTTGACAATTTGAAAACTTTAAAGCTGCAGCGTTGTGACTTCAAATCATATGCAATCCCATCCAATGTTCTTCTTTCTTTGAAGATCTTAGAAGAATTGGAAGTGGATCAGTGCTCCACTATACAAACCATATTTGAAATGGACAACACTAAGATCAAGGAAACATCATTCCAGCTGAAGAAGCTGACTTTAACTGGGCTACAAAATGTGACGCATGTGTGGCAACATGAAAAACAGGGGATTCTGGGCTTTCAAAATCTGCAGCAGGTGACAATCTTAGGTTGTGGCGAATTGAAAGCTGTGTTTCCATTATCCTTGGCCAGAAATCTTAAAAAGCTCGAGGAACTCGCTGTAGCACAATGTGAAGGGTTGCTTGAAATAGTTAGAAAGGAAGAGGAAGCAATGGAAAGAACAGAAAATTTTGAGTTTCCGAATTTAACCACGCTAGCACTGTGTCTTTTGCCCCGATTCAGTTACTTTTACTCGGGAAATTTCACTTTGGAGTGCCCCGATTTAAATGAGTTACAGGTGTTTGGATGTAGTGACGAGTTGGAACTGCTTCACTCTCATCAACAACAACTTCTTGAAAATCCCAGCAGGAGACAACCCCTCTTCACCAATAAAGATGCTATTTTCAAGGTGGAGAAGTTAATGCTCAATAAAAATCACACTTTGGAATTAAGTTCATGGCTTGGACAATCTATGAATCAAGGCCTTCCGTGTTTAAACGAACTTAACCTTGTTGACTTTGATGAAGAGAAGAACAATGATGTCAGAGAGAACTCTACTACACCATTAGAGATACTAGACAAGACACCCAATTTAGAGATCATTGAAATATATGGCAACCATTGCAAAACCATTAATATTCCCGAAGCGGCTAAGAGGATACTTGACTTGAAAGAATTGAAGTTGTGGTCACTATCTGAGCTGAACTCCATTAGTGGTCTAGAGTACTTGTTAAAGCTGCGGCTATTACAGGTTTATGAATGTCCAAAATTGACAACGTTAGGACAATCTTGCTCCAATCTGAAGGAATTGCATATAGAGGGGTGTCATGGATTGCAGTGTTTATTCACATCCTCCTCAGCAAAAATGCTGATACAGCTTCAGGAGCTGAAAGTTTTGTACTGTGATTCATTGAAAGAAATAGTGGGAAAAGAACAGCAAAGTGATGAAACAGCTACAGTTTCTGCAGTTGAATTCAAGCGGCTAGAGAGGATAAGTCTTTTATCTTTGGAAAGGCTGGAATGCTTTTATTCAGAGAATGGCATGTTGAAGTTACCCTCTTTGATTTCTGTGGAAATTGAGCAGTGTCCCAGGATGAAAATTTTCTCTCAAACAGCAATACATGTGGAACCTTCTAGACCAATTCAAGTTTCTTACACCTCATCAAATGATGATTTGCTCTTCTGCGATGATCTAAACGTCGCTGTTGCGTGGAAGTCTCTACAACAGGAATATCATCTTATTCTCCGGAATCACCCGGAGTTGAAAGATTTATGGCTTGGTAAAATGCATTTCCCAGAGGTCTCATACTCTAGTTTCGATTATTTGAAACTCTTGGAAGTGGAAGGCTGTGAATTCTTAACAACTGCAATACCATCTCATTTATTTCCGTTACTGGGGGGATTAAATACATTGAAGGTGCGGGAATGCAATTCTGTTGAGACAATTTTTGAAGTAAAAGATACACCAAACATGATTGTTATTCCTTTGTTTACAATGACTTTAGAGAAACTTCCAACCCTGAGGCATGTTTGGAACAAAGATCCTGAAGGAAAGCTCAGTCATCCAGACATAATGAAGATTATTGTTGATGAATGTAAAAGCATAAGATTCTTGCTCCCAGAGTCAGTTGCCAAGGGTGACATAGAAAGGTTAGAAGTGAAGAATTGTGCGGAGTTAGTTGAAATTGTCACAGGAGATGAATTAGGTGTAAACAAACAGGTCAGCATGAACATGTTCCCCAATCTATCCAGTCTAACTCTCTGGAATTTGCCAAATCTGAACTTCCTTTATCATGGAAGGCAAGAACGTGAATTTTCATCATCAAATGCATTACTGCCATGGCATTTGTTACCTTGCCTTCATAAATTGGAAGAGTTGGTGGTTGGGAAATGTGGTTCCTTTGAAACAATATTTGATGTGGAAGATGCACCAAAAAATGATGAAAATGCAAACATGATTACTGTTATTCCTTTGAAGAAATTGACTTTGGAGCATCTGCCAGCTCTGAGGAAAGTTTGGAACAAGGATCCTAAAGGAAGTGTCAGCCTTCCATGTCTGGAGGAAGTGGTTGTTATTGATTGTAAAAGCATAAAGAATTTGCTCCCAATATCAGTTTCCATGGGTAGCATACAAAAATTAGATGTGAGGAACTGTGAGGAGTTAGTTGAAATTGTTGCAAACAATGAAGCAGCCACTGAAGAAACAAACAAAGAGCTTAGTATGTTCCCTACGTTAACATCGTTGACGCTGCAGGATTTGCCAGATCTTACACACATTTATGCTGGAATGCAAATTCTAAATTGGCCCGAGCTAAGAGAACTGGATGTTTATCATTGTAAATTGCTGAAGAAATTTGCACCAGATAGTATTGCTTCAGCTGGAAAGAGTCTTGATGATGATGCTGATGAGGAATGGTTTACCCATTTCATCAATGCGTTCATTTTGCAACAATTCAAAAATCGAGATGTTACCCCTCACTTGGAGCGACTGTCACTGGACATGGAAGGTGTGAAGATGCTTGAGAAAGTACTACTTCATCTGGACAACCAAAACATAAAATATCTTAAATTGCAGGGCTTTGATGATATTGATGAGTCAGATGCATTTCCCCTTGAATTCTTTTCAAAGGTGCCACTGCCCAATATTGAGATGCTTGCGGTGGTCGACAGTGCTTTCAAAGAGATATTCCCTTCAAAACTGCCTGACACAGAAAACTATGCTAAGATCCTTTCACGGCTTAAGAAATTGGAACTCAGGAATCTACACAAGCTTGAATCCACTGGATTAGAACTTCTTACCTGGGTAGCCTCCTCTAATCTGGCATGGCTGGAAGTAGAGTGTTGTGCAAGTTTGAAGCTTTTGTTTACGTCTTCAACCGCCAAATATCTTGTTCAACTGCAACATTTATACATTTCCAACTGTGAAGCACTGCAAAGTGTAATAGTGGCTTATCAATTACATGATGATGATGATGTCATCACATTCCAAGAGCTCAAGGAATTGTCTCTTAGCAAGTTACCAAAACTTGAGAACTTCTACACTGGAAAGTCAACTTTGAATTTCCCAGTTCTGAAGGACGTCATGGTTACTGAATGCAACAGAATGGAACATTTGTTCACATTCTCAACTGCCAAAAGCTTGAAACTGTTGAACAAGATGGAGATTTCCAAGTGTGAGTCATTGAAATCAATAGTAGTGGCAACAGAAGAGGTAGATAAGCCACGTGAAAATCTCGCGTTCCCGAATCTCGAGAAGCTGTCTCTTAGCCAATTGCCAAAACTTGAAAGCTTTTTCGCGGGAAACTCAACTCTGAAAATCCAAAAGAATTGGGTTGAAGTTTGGATCAGTGAATGCAGCAGCATGAAAACTTTCTCACAAGGTGATGTGGAACTACCCAACCATCAAAACTTACGGAGGGTGTACATAGATGGAGTTCGTTTCTCGGAGGATAACCTAAATGCTATAGTCAGTCAAAAGTTTGAGAATCGAAGCAAGGAAGCAGCACTGATGAGTTAG 5820 0.3864 MLRFQWFGRLEVIPPGLISNLTSLEELYMSNISTEWESHDNASLSELENLNLSNIDLQIPSVKFSKLEKIELSSIQIHQLWIGQKPPFAEXVHLEVKGCGNLEFLLSLSMARNMVKLQSLSITECDKMKLIFSKDKGSTDVKKKETIFPNLKNIKVSNMKSLSEICDFEFPVDSFVKLETAVINECGKLNHVFTHDMVGIFEHLSSLRVTNCKSIKAIFNLDGKNKLAGTSRYATIKLQDVHLQTLPKLEHLFNWKKDRPEGNFNLKNLQKIWVQECGRLENIFSFHVAKTIEDNLEYLVVSDCSQLREIVAEEEDANNPSNTIEFTKLATVKFLRLPKFKRFCRRDYELKLPALNDLSIEICDKLEPHFKRDTTDAQRKPMYFFEEALNELKSLQIGSQHAKLLSNYDSRMDKLEELHFSQLDSTDVLYAFLHSNPNLMSLWLNRCYFQKLVPLERPPNIERLGVVPKLKGLNLMDLPYLEGIGFERDAILQMIESLTLKDCPRLETLAPSSVCLSHLTKLEVVGCKGLKYLISPSTARRLGQLNTMKIINCQSLVEIVSCDRENLGEVDLIFEQLTTLELVALDSLQSFCSFKSCSFHFPILEKFVMNVCPKLENFSQGVSNTPILQKVYLDDDKEKMRWYWKENLQDTIQYIFKHNDFFECMEELSVIEHLDYLEPFWESNKSLQEDLFDNLKTLKLQRCDFKSYAIPSNVLLSLKILEELEVDQCSTIQTIFEMDNTKIKETSFQLKKLTLTGLQNVTHVWQHEKQGILGFQNLQQVTILGCGELKAVFPLSLARNLKKLEELAVAQCEGLLEIVRKEEEAMERTENFEFPNLTTLALCLLPRFSYFYSGNFTLECPDLNELQVFGCSDELELLHSHQQQLLENPSRRQPLFTNKDAIFKVEKLMLNKNHTLELSSWLGQSMNQGLPCLNELNLVDFDEEKNNDVRENSTTPLEILDKTPNLEIIEIYGNHCKTINIPEAAKRILDLKELKLWSLSELNSISGLEYLLKLRLLQVYECPKLTTLGQSCSNLKELHIEGCHGLQCLFTSSSAKMLIQLQELKVLYCDSLKEIVGKEQQSDETATVSAVEFKRLERISLLSLERLECFYSENGMLKLPSLISVEIEQCPRMKIFSQTAIHVEPSRPIQVSYTSSNDDLLFCDDLNVAVAWKSLQQEYHLILRNHPELKDLWLGKMHFPEVSYSSFDYLKLLEVEGCEFLTTAIPSHLFPLLGGLNTLKVRECNSVETIFEVKDTPNMIVIPLFTMTLEKLPTLRHVWNKDPEGKLSHPDIMKIIVDECKSIRFLLPESVAKGDIERLEVKNCAELVEIVTGDELGVNKQVSMNMFPNLSSLTLWNLPNLNFLYHGRQEREFSSSNALLPWHLLPCLHKLEELVVGKCGSFETIFDVEDAPKNDENANMITVIPLKKLTLEHLPALRKVWNKDPKGSVSLPCLEEVVVIDCKSIKNLLPISVSMGSIQKLDVRNCEELVEIVANNEAATEETNKELSMFPTLTSLTLQDLPDLTHIYAGMQILNWPELRELDVYHCKLLKKFAPDSIASAGKSLDDDADEEWFTHFINAFILQQFKNRDVTPHLERLSLDMEGVKMLEKVLLHLDNQNIKYLKLQGFDDIDESDAFPLEFFSKVPLPNIEMLAVVDSAFKEIFPSKLPDTENYAKILSRLKKLELRNLHKLESTGLELLTWVASSNLAWLEVECCASLKLLFTSSTAKYLVQLQHLYISNCEALQSVIVAYQLHDDDDVITFQELKELSLSKLPKLENFYTGKSTLNFPVLKDVMVTECNRMEHLFTFSTAKSLKLLNKMEISKCESLKSIVVATEEVDKPRENLAFPNLEKLSLSQLPKLESFFAGNSTLKIQKNWVEVWISECSSMKTFSQGDVELPNHQNLRRVYIDGVRFSEDNLNAIVSQKFENRSKEAALMS* 1940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0511 1939 Gene3D Ribonuclease Inhibitor 1162 1474 IPR032675 -
Amo12g0511 1939 PANTHER - 265 369 - -
Amo12g0511 1939 PANTHER RPP4C3 9 56 - -
Amo12g0511 1939 PANTHER RPP4C3 1031 1139 - -
Amo12g0511 1939 SUPERFAMILY L domain-like 666 1549 - -
Amo12g0511 1939 SUPERFAMILY L domain-like 9 307 - -
Amo12g0511 1939 PANTHER - 775 872 - -
Amo12g0511 1939 PANTHER - 1448 1557 - -
Amo12g0511 1939 PANTHER - 147 231 - -
Amo12g0511 1939 Gene3D Ribonuclease Inhibitor 5 335 IPR032675 -
Amo12g0511 1939 PANTHER - 1797 1923 - -
Amo12g0511 1939 PANTHER - 1697 1804 - -
Amo12g0511 1939 PANTHER - 62 136 - -
Amo12g0511 1939 PANTHER - 9 56 - -
Amo12g0511 1939 PANTHER RPP4C3 775 872 - -
Amo12g0511 1939 PANTHER RPP4C3 1448 1557 - -
Amo12g0511 1939 PANTHER RPP4C3 147 231 - -
Amo12g0511 1939 SUPERFAMILY RNI-like 1032 1251 - -
Amo12g0511 1939 Gene3D Ribonuclease Inhibitor 1578 1843 IPR032675 -
Amo12g0511 1939 Gene3D Ribonuclease Inhibitor 900 1086 IPR032675 -
Amo12g0511 1939 Gene3D Ribonuclease Inhibitor 1475 1566 IPR032675 -
Amo12g0511 1939 Gene3D Ribonuclease Inhibitor 384 547 IPR032675 -
Amo12g0511 1939 Gene3D Ribonuclease Inhibitor 646 894 IPR032675 -
Amo12g0511 1939 SUPERFAMILY RNI-like 1427 1750 - -
Amo12g0511 1939 PANTHER RPP4C3 1797 1923 - -
Amo12g0511 1939 PANTHER RPP4C3 1697 1804 - -
Amo12g0511 1939 PANTHER RPP4C3 265 369 - -
Amo12g0511 1939 PANTHER RPP4C3 62 136 - -
Amo12g0511 1939 PANTHER - 484 651 - -
Amo12g0511 1939 PANTHER - 1031 1139 - -
Amo12g0511 1939 PANTHER RPP4C3 484 651 - -
Amo12g0511 1939 SUPERFAMILY RNI-like 395 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0511 Amo-Chr12 8735351 8755772 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0511 - - aip:107626889 3542.67