Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0487 ATGGATTCCATCAAAACGAAACCAAGAACCCTCGAGCTGACGGTGCTTTCCGCCGAGAACCTCCGCGTGAACGGAAAAACCGCCACCAAGAACGTGTTCGTGGTGGTACGCGCCGAATCCCTAACCGCCCACACGACGTCGTGTAAGGGAAACGGCAGCAACTCCAACGGCTTTGTCTCGTGGAACGAGAAGTTTGTTGTGGAAGTTGCGGCACACGCGCGTAGCATCGCGTTTGAGGTGAAGTGCAAGACGTCCCCCACGGGATCCGTTAGGGACGTTGGGGTTGCCAGGGTGGCACTATCTGATTTCCTGGGAACCGTTGTACCCGATCACTGCCTTCAGTTCTTGTGTTACCGGTTAAGGGATTGGGATGGCTTGAAGAATGGCGTTATTAATTTCTCCGTTAGGGATTTGGCCGCTGCTCCGCCGCTTGCGAAGGTGGTTGGTGGTGGCTGTGACGGTTTTCATGGGTTCCAAGAGGTGAGTGGGATAGTTGAGTGTGGGTTTGGATTACGGTTTGTAAAGGGAGCTGTAGCTTGA 540 0.5426 MDSIKTKPRTLELTVLSAENLRVNGKTATKNVFVVVRAESLTAHTTSCKGNGSNSNGFVSWNEKFVVEVAAHARSIAFEVKCKTSPTGSVRDVGVARVALSDFLGTVVPDHCLQFLCYRLRDWDGLKNGVINFSVRDLAAAPPLAKVVGGGCDGFHGFQEVSGIVECGFGLRFVKGAVA* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0487 179 SMART C2_3c 10 112 IPR000008 -
Amo12g0487 179 Gene3D C2 domain 9 136 IPR035892 -
Amo12g0487 179 PANTHER INGRESSION PROTEIN FIC1 8 138 - -
Amo12g0487 179 Pfam C2 domain 10 103 IPR000008 -
Amo12g0487 179 ProSiteProfiles C2 domain profile. 1 113 IPR000008 -
Amo12g0487 179 PANTHER BON1-ASSOCIATED-LIKE PROTEIN 8 138 - -
Amo12g0487 179 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 136 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0487 Amo-Chr12 7751491 7754086 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0487 - - adu:107473351 322.013