Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0479 ATGGCGTCAAACACTTCTTCTTCTTCTTTCGTTCCTGTGTCACTGAAGGTTTCTCGGGAAATAACGGACCCTCGACACGCTCAAGAGACATTACACTTATTCAACGCTGTTATGGGCGGCGACGCCGCCGATCACTGCAACTCCCCTGAATTCTTCCTCGATTTCGTTCGCAGCTCCGTCACCGTTGATCACATCCGACGTGGACACATCTCTTCCACTATCGTCCCCAAACCGCCTCTCTGTAATACCTATGGAACATTGCATGGAGGATCTGTTGGATCTTTAGTTAATGTTCTGTCTCATGCCTGTGCTAGAACTATAGTTGGTGAGGACAAAGAACTTTTTCTTGGAGAAACTAGCATTTCTTACCTTTCTGCCACTCCAATACATGAAGAATTGGTAGCTAATGCCTCAGTGGTAAAGAGTGGAAGAAATTTGAGTGTAGTTGCACTTGACTTCAAGCTCAAGAAAACTGGAAATCCTGTCTATATTTGTCATTCTACCTTTTATCACATGCCTGCTAGTCTATGA 531 0.4463 MASNTSSSSFVPVSLKVSREITDPRHAQETLHLFNAVMGGDAADHCNSPEFFLDFVRSSVTVDHIRRGHISSTIVPKPPLCNTYGTLHGGSVGSLVNVLSHACARTIVGEDKELFLGETSISYLSATPIHEELVANASVVKSGRNLSVVALDFKLKKTGNPVYICHSTFYHMPASL* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0479 176 CDD PaaI_thioesterase 60 170 - -
Amo12g0479 176 Pfam Thioesterase superfamily 84 157 IPR006683 -
Amo12g0479 176 PANTHER THIOESTERASE SUPERFAMILY MEMBER-RELATED 20 175 IPR039298 GO:0047617
Amo12g0479 176 PANTHER OS07G0462700 PROTEIN 20 175 - -
Amo12g0479 176 Gene3D Hotdog Thioesterase 43 172 - -
Amo12g0479 176 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 59 170 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0479 Amo-Chr12 7687776 7690058 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0479 K17362 - gmx:100499764 214.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0479 12 7687776 7690058 Amo12g0479 12 7687776 7690058 ECH
Amo12g0479 12 7687776 7690058 Amo02g0611 02 7928904 7931464 hybridization