Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0471 ATGGGTAAGAAGAAGGTTCTTGTTGTGGGAGGAACTGGTTACCTTGGTCAGCATCTCTTACAAGCCTATTATGCTTCTTCTTCTTCTTCTGATACCAATGGAAATGGAGTCTCTTCTTTCGATCTGGCATTCACTCATCACTCTACTCCTCCGCCAAAGCTTCTTCTTCATGCCATTCCCGGCTCCATTCCTTTCCAAGTTGATTTGAAAACTGGCGTTGGATTTGAATCCATTTCCAATGCATTTGGTCAGCCTGATGTTGTTGTTAATTGTGCTGCCATGTCAGTGCCTCGTGCTTGTGAAACTGATCCTGATACTGCACATGCTATTAACGTGCCATCAGCTCTTGTAAATTGGTTGCAAAGCTTTAAAGAGAAAAGCAGTCTTCTCATTCATCTCTCAACAGATCAAGTTTATGAAGGGGAAAAGTCCTTTTACAAGGAAGAAGACATTGCTATTCCGGTAAATGTTTATGGTAAAACTAAAGTTGCAGCTGAGCAGTTCATTTCCGAAAATTACTCGAATTATGCAATTTTGAGAAGCAGTATCATCTATGGACCACAGACAGTCTCACCTGTTCCAAAATCTCTTCCAATTCAGTGGATGGATGGTGTCCTTGCTAAAGGAGAAGAAGTGCAGTTCTTTCACGATGAATTCCGTTGTCCGATTTTTGTTAAGGATCTTGTAAATATGATTCTGGCTTTAACAAGGTTATGGATGTCAGAGGATAAGCAAATACAATTGCTACTCAATACTGGTGGACCTGATAGGGTATCGCGAGTTCAAATGGCCGAGGCTGTTGCACAGTTTAGAGGCTATGACACCTCAAAAATCAAATCAGTGTCTGCCTCGTCGGTTGATAGAGGTGTGAAGTCCCCATCTGACATATCAATGGATATTACTAGATTGGTTCAAACACTAAAAATTCATCCTGTTTCATTCAAGGATGGTGTCAGATTAACGCTTGAAGCTGAAGCGAAAAATTGA 987 0.4103 MGKKKVLVVGGTGYLGQHLLQAYYASSSSSDTNGNGVSSFDLAFTHHSTPPPKLLLHAIPGSIPFQVDLKTGVGFESISNAFGQPDVVVNCAAMSVPRACETDPDTAHAINVPSALVNWLQSFKEKSSLLIHLSTDQVYEGEKSFYKEEDIAIPVNVYGKTKVAAEQFISENYSNYAILRSSIIYGPQTVSPVPKSLPIQWMDGVLAKGEEVQFFHDEFRCPIFVKDLVNMILALTRLWMSEDKQIQLLLNTGGPDRVSRVQMAEAVAQFRGYDTSKIKSVSASSVDRGVKSPSDISMDITRLVQTLKIHPVSFKDGVRLTLEAEAKN* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0471 328 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 3 327 - -
Amo12g0471 328 Gene3D - 2 325 - -
Amo12g0471 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 323 IPR036291 -
Amo12g0471 328 Pfam RmlD substrate binding domain 5 324 IPR029903 -
Amo12g0471 328 CDD dTDP_HR_like_SDR_e 5 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0471 Amo-Chr12 7614436 7617593 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0471 - - gmx:100808137 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0471 12 7614436 7617593 Amo12g0471 12 7614436 7617593 ECH
Amo12g0471 12 7614436 7617593 Amo02g0616 02 7972955 7976053 hybridization