Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0455 ATGAGGCCGTCAGGGGCCAAATCCCATGGTGTTCAGAACAATCGAACCACAAACAAGAGAAATTTCAAGATTGAGAAGCCTTTTAAACAAAAATTATTGTACCTGCAGGTTGAGGAACATTCTCACGACCATCAACATGTCAAAAAAGAAAGTGATCAACAAATTAAGGTGACATCTTCTGTTTATGTTCCGGAGAAACGAATACTTGAACTTGTCCTTGACACTTTACAAAGTTACCTTAATGTGATTTGTGGCAAGGTTGAGGACTATTACACTATAATTGAAGAGCCTATGGATTTTGGCACAATGAGGGCTAAACTACATGAAGGGATGTATAAGAGTCTAGAACAATTTGAGCACGATGTATTTTTAATATTCAACAATGCAATGCATTTTAATTCTTCTGGTACCATATATTTCAGACAGGCTCGTGCTATAAAAGAACTAGCTAGGAAAGTGTTTGATGTATTAAAAAGCAGCCCAGAGAAGTTTGAATTGGAGTTCTCAGAAACGAAGCGAAAAGTTGTTGGTCGGAGAAACCAAGGAGGTTTTAGCAGGGATTCAACAACAACTACAGACATGAAATCCATAATCTCAATTCAACACACACGAAAAGTTGTTATGTCTATGCATGATGATGAAGGCAGAGATAATCTTGAGGTTCCTATAGGAGGCTCTAAAGAGGGCAATGGATATAAAACTATGGTGGATGACAAGCGTTGTACTTATAAGCCTTTGTCTTTTACTAAGGATGATTCAATATTTACCACAGTTTATGGTAAATTGAACCAACTTGAGCGTGTTAATAAGCGAGATGTTGGGTATAAAGATAGCTTGATGCTGTTCACTAAAGATTTAGGACCTACGGCCAAAAACATAGCGAAAAGAAAAATACTTGAATGTGAAGTTCGTAGTGCAGCATTTGAAGACGCATGTCGATCAGATTCTAATGGCAATGCAAGAAGAGGTCCCTTTCTTTCTACTACTCAAGTAGGGAAGAAGAATCAAGGGCTTATTCCGTTTAATACCAATCCTCATCATTTTGATCTACGCCATTTCCTCTGCAATCGCAGTTTTCAGCACTAA 1086 0.3785 MRPSGAKSHGVQNNRTTNKRNFKIEKPFKQKLLYLQVEEHSHDHQHVKKESDQQIKVTSSVYVPEKRILELVLDTLQSYLNVICGKVEDYYTIIEEPMDFGTMRAKLHEGMYKSLEQFEHDVFLIFNNAMHFNSSGTIYFRQARAIKELARKVFDVLKSSPEKFELEFSETKRKVVGRRNQGGFSRDSTTTTDMKSIISIQHTRKVVMSMHDDEGRDNLEVPIGGSKEGNGYKTMVDDKRCTYKPLSFTKDDSIFTTVYGKLNQLERVNKRDVGYKDSLMLFTKDLGPTAKNIAKRKILECEVRSAAFEDACRSDSNGNARRGPFLSTTQVGKKNQGLIPFNTNPHHFDLRHFLCNRSFQH* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0455 361 SMART bromo_6 58 159 IPR001487 GO:0005515
Amo12g0455 361 PANTHER BROMODOMAIN CONTAINING PROTEIN 11 328 - -
Amo12g0455 361 CDD Bromodomain 65 154 - -
Amo12g0455 361 MobiDBLite consensus disorder prediction 1 20 - -
Amo12g0455 361 ProSiteProfiles Bromodomain profile. 87 140 IPR001487 GO:0005515
Amo12g0455 361 Gene3D - 28 179 IPR036427 GO:0005515
Amo12g0455 361 PRINTS Bromodomain signature 87 103 IPR001487 GO:0005515
Amo12g0455 361 PRINTS Bromodomain signature 121 140 IPR001487 GO:0005515
Amo12g0455 361 PRINTS Bromodomain signature 103 121 IPR001487 GO:0005515
Amo12g0455 361 SUPERFAMILY Bromodomain 68 164 IPR036427 GO:0005515
Amo12g0455 361 Pfam Bromodomain 87 144 IPR001487 GO:0005515
Amo12g0455 361 PANTHER BROMODOMAIN CONTAINING PROTEIN, EXPRESSED 11 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0455 Amo-Chr12 7419301 7422976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0455 K22184 - gmx:102667935 294.278