Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0434 ATGATGGGTTTTCAGTTTGTGAGTCGCACCCACCATAACCGTTGCTATGGAAATCTGATTCCGATTCTGATTCTGATTATTCTGATCGCACAGCAATCGAATGTGAATGGCTCCATCCACGAGTACTCGAAGGAGCCCTTCACCCACCGCTCCAATGCTTTCTTCTTCCACGGCGGCAGCGAGGCCCTCTTCGCCTCCTCCTCCGCCTCCCAATCCTTCATAAAGTTCGAGAGCGTGGTCTTCACGCGCCCCAAATTCTCCGCCGCGAAGCACGGCGACATGCAGCAGAACACGGGCCTGGTGGAGGCCATCGTCCTGGAAGTGAAGGATCGCCTCCGCATCGGCGGGTCCCACCTCAAATCGGAGCTTATCTGCTGCACCAAGGAGCTTTCCGATAGCCACCTCTGCAACCTCGGCGAGGTCATCATCGAGAAGAATCCCGACAACCCGGAGTTTCCGAGGCGCATCAAGACCTTCTTCCAGGGCACCGAGGAGCATACCGCCATGGAGACACAAACCGTTACCGTCAACGCCACGGGAATGTACTACCTCTACTTCATGTTCTGCGATCCGGAGCTGCAAGGCACCATCATCTCCGGCAGAACCGTGTGGCGGAACCCTAACGGTTATTTACCGGGCAAAATGATCCCTCTGATGCGATTCTACGGGTTAATGTCGCTGGCGTATCTTGTGATGGGGATGGTTTGGTTCGCGAGATTCGTGCAGCTGTGGAAGGATATCATCCATTTGCATTATCATATCACGGCGGTGATTGCTTTGGGGATGTGCGAGATGGCGGTTTGGTACTTCGAGTATGCCAATTTGAATGCCACCGGGAGCAGGCCCATGGGGATTACGGTGTGGGCCGTAAGCTTGAGCACGGTGAAGAAGACGGTGTCGCGGCTTCTGCTGCTGGTTGTGTCCATGGGATATGGTGTGGTGAGGCCCACCATTGGAGGCAGTGGGATGAGCTCCAAGTCCAGGATGATGCTTCTTGCTGTACTCTACTTTGTGGCCTCCGAGGCTCTCCTCCTTGTCGAGCATTTGGGCAACATTAACGACTTTTCCGGCAATGCTAAGCTTCTTCTTGTGCTCCCTGTTGTTTGCCTCGATTCCTGCTTCATTCTCTGGATCTTCTCTTCTTTGTCCAGCACCCTCGAGAAGCTGCAGATGAGGAGAAACTTGGCTAAGCTGGACCTCTACAGAAAATTCACAAATACGCTTGCCGTCTCTGTCTTGCTCTCTATTGCATGGATTGGCTTTGAGGTACTCTATAGTGTTTACTCTTTTTACTCTATTATATAG 1305 0.5287 MMGFQFVSRTHHNRCYGNLIPILILIILIAQQSNVNGSIHEYSKEPFTHRSNAFFFHGGSEALFASSSASQSFIKFESVVFTRPKFSAAKHGDMQQNTGLVEAIVLEVKDRLRIGGSHLKSELICCTKELSDSHLCNLGEVIIEKNPDNPEFPRRIKTFFQGTEEHTAMETQTVTVNATGMYYLYFMFCDPELQGTIISGRTVWRNPNGYLPGKMIPLMRFYGLMSLAYLVMGMVWFARFVQLWKDIIHLHYHITAVIALGMCEMAVWYFEYANLNATGSRPMGITVWAVSLSTVKKTVSRLLLLVVSMGYGVVRPTIGGSGMSSKSRMMLLAVLYFVASEALLLVEHLGNINDFSGNAKLLLVLPVVCLDSCFILWIFSSLSSTLEKLQMRRNLAKLDLYRKFTNTLAVSVLLSIAWIGFEVLYSVYSFYSII* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0434 434 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR FAMILY PROTEIN 21 426 - -
Amo12g0434 434 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 21 426 IPR009637 GO:0016021
Amo12g0434 434 Pfam Lung seven transmembrane receptor 177 425 IPR009637 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0434 Amo-Chr12 7107484 7110643 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0434 - - gmx:100816334 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0434 12 7107484 7110643 Amo02g0514 02 6367145 6369931 hybridization