Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0418 ATGGCGCAATCTCCCAATATACAGCGTACGGACTCAAACACGCCGTTAATGGGACAAAGAAATGACTTGGCAAATGATGGACTTGTTCCTCAGATATTTTCATCTGTTCCTTCTCTCACTGAAGCTGCTGCTTATCTTTCACAAACAACGTCGTTCCTTACTGGTTGTTTCTATGATTATTCAGTAGAACATTCCTCTGGAGATTCCAGTGACTCTTCTGGCGTTCATGCACAAGAGCTTGTGTCTTTTGCTTCAGGGGAAACTGAGGCATCTTCTTCTAATAAAACATTTCAAACTTCTTATGCACCTCTGAATACAAATGAGGACATCACAGAGACTTCTGTTGGAGATTCATCAGGAAATGCCGGTGCACTAGTAAGATCAAATCCTTCTGGACAAACTGGAATTCCCCTCTTCCAAAGCTTGATTGAGCGTGCTCGGAGGACTGTGCGTGGATCTGCCGATGATATAGGATGGCTTGGACGTGATCCTGGAATGCCCCCAGTTGAAGATGGAACGGAGAGGTTTCATGAGATTCTTGATGAAATCAAGCATGGTGTTCATAGGTTACCAAATTCTATGATTTATTTGTTAATACCAGGTCTTTTTAGCAATCATGGCCCACTCTACTTTGTCAATACAAAAGCCAGTTTCTCAAAAATGGGTTTGACTTGTCATATTGCTAAGATTCATAGTGAGGCTTCAGTTGAGAAAAATGCCAGAGAGCTAAAAGAGTATATTGAGGAAATTTGTTGGGGTTCAAACAAACGTGTTTTGCTTCTTGGACATAGCAAGGGAGGAGTAGATGCAGCAGCTGCTTTATCATTATATTGGTCTGATTTGAAAGATAAGGTCGCTGGATTGGCACTAGCACAAAGTCCATATGGTGGTACGCCAATAGCTTCAGATCTACTGCGAGAAGGACAACTTGGCGATTATGTAAATATACGAAAACTTACTGAGATTCTTATCTGTAAAGTAATTAAGGGTGACATGAGAGCCTTAGAAGACTTGACGTATGAAAGGCGGAGGGAGTTTTTAAAGGAGCATCATCTACCAGATGAACTTCCTGTTGTTTCCTTTCGTACTGAAGCTAGTATTTCCCCTGCCGTTTTAGCGACGTTATCTCATGTTGCCCATGCTGAACTACCCACAGTTGCTGGCGAACCTAAAAAACTTCCTGTGGTGATGCCCTTAGGTGCTGCTATGGCTGCTTGCGCACAGTTGCTGCAGGTTAGATATGGTGAGAAGAGTGACGGGCTTGTGACATGCCGGGATGCAGAAGTTCCAGGATCTGTTGTGGTGCGACCTAAACGAAAACTGGACCATGCGTGGATGGTTTATTCATCACTAAATGATGACCCTAAAGAAGGGGACGCATCTCAGGTGTGCGAGGCTCTCTTGTATTTACTTGTGGAACTTGGTCAGAAAAAGAGGCACGGGCTTGAAAGGAAAGACAAGTTGCGAACTAGGTGGAACGTGAATCCTCCAAGAGGAATCGCCATCGTCTTGGACGAAGAAGCTCCTAAATGGCAGCTCAGATGA 1545 0.4382 MAQSPNIQRTDSNTPLMGQRNDLANDGLVPQIFSSVPSLTEAAAYLSQTTSFLTGCFYDYSVEHSSGDSSDSSGVHAQELVSFASGETEASSSNKTFQTSYAPLNTNEDITETSVGDSSGNAGALVRSNPSGQTGIPLFQSLIERARRTVRGSADDIGWLGRDPGMPPVEDGTERFHEILDEIKHGVHRLPNSMIYLLIPGLFSNHGPLYFVNTKASFSKMGLTCHIAKIHSEASVEKNARELKEYIEEICWGSNKRVLLLGHSKGGVDAAAALSLYWSDLKDKVAGLALAQSPYGGTPIASDLLREGQLGDYVNIRKLTEILICKVIKGDMRALEDLTYERRREFLKEHHLPDELPVVSFRTEASISPAVLATLSHVAHAELPTVAGEPKKLPVVMPLGAAMAACAQLLQVRYGEKSDGLVTCRDAEVPGSVVVRPKRKLDHAWMVYSSLNDDPKEGDASQVCEALLYLLVELGQKKRHGLERKDKLRTRWNVNPPRGIAIVLDEEAPKWQLR* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0418 514 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 20 486 - -
Amo12g0418 514 Gene3D alpha/beta hydrolase 195 473 IPR029058 -
Amo12g0418 514 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 20 486 - -
Amo12g0418 514 MobiDBLite consensus disorder prediction 1 20 - -
Amo12g0418 514 MobiDBLite consensus disorder prediction 1 23 - -
Amo12g0418 514 SUPERFAMILY alpha/beta-Hydrolases 197 333 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0418 Amo-Chr12 6882430 6888059 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0418 - - gmx:100811795 741.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0418 12 6882430 6888059 Amo12g0418 12 6882430 6888059 ECH
Amo12g0418 12 6882430 6888059 Amo02g0510 02 6330911 6332883 hybridization