LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo12g0413	ATGGAAGAAGAAAAAGAGAAACCACCAACACCACACATAGTTCTAGTTTCAATCCCTGCACTTTCTCACCAAATCTCAATCCTTGAATTTGCAAAAAGACTCCTTAATCTCCACAAAGAACATTGCTTCCATGTCACATGCATCATTCCTACTCTTCCCTCACAAAACAACAATGCCTCCAAACCCTTTTTCTTTGATTCTCTCCCTCCAAACGTTCACTGCATCTTCCTTCCACCGGTCAACTTCGATGATCTCAGAAACGACCCATCAATCTCCCTTGAAGCTCAGATTTCGCTTGCAGTACTGCATCTAAGTAAGGACCTCGAACTCAAACTCAAACCCTTGTCCTACATATACTTYGCTTGCTCTGCCATGTTGCTATCTCTGTGCCTTCACTCACCAAATCTTGATCAAATAGTTCCTTGTGAGTTTAGGGATTACCCGAACCTTATTCAAATTCCTGGTTGCATCTCTGTTCATGGCAAAAATCTTCCTAACAGTGTTCAAGATAGGTCTAGCTTGGCATACAAGTTGTATCTTCAAAGGTGTAAGGACTACTTTCTCGCTGATGGGATCTTGGTGAATAGCTTCATGGAAATGGAAGAAGGAGCATTCAAAGCATTATTGTCACAATCACAAGAAGAAGCTAACCCTCCTGTGTATGGAATTGGACCCATTACACAAACTAGTGGCCATCATCASAWAAAYAATAATGGGTGGGARTGTTTGAAATGGTTGGATAATCAACCATCAAACTCGGTTCTTTATGTTTCKTTTGGGAGTGGTGGAACACTCTCACAAGAACAGATCAAAGAGCTTGCTTTGGGTTTGGAACTTAGCGGCCATAGATTCTTGTGGGTTAATGTGAGAGAACCTAATGATAAGGCATATGCTAGTTACCTAAGTAACGAGGGTGCTGACCCTTTGAGTTTCTTGCCAGAAGGGTTCATAGAGAGAACAAAGGAGAAAGGTTTGATTCTAGGAAGCTGGGCACCTCAGATTGAAGTTCTTGGTCATGGTTCAGTTGGTGCATTCTTGAGTCACTGCGGATGGAACTCGGTTCTTGAGAGTGTGGTGAAGGGAGTGCCAATGATAGCGTGGCCTCTCTTTGCTGAACAGAGAACCAATGCTGCTATGGTATGCATTGCAATGGTTCCGTGCCCTGGCCATGGCCATTTGATTCCATTCATTGAGTTTGCAAAGCGATTCCTTCTTCATAATAACAATAATGGTGTGTTCTTCCATGTCACAATCCTTGTTCCAACACAGGGCCCTCCTTCTTCTTCCACCATAGCCATCCTCAACGCTCTACCTTCAAACATGGACTTCACCTTTCTCCCTTCCGTCACCATGGACCACCTTCACAACCCTCCTACTCACCCCATTCCACGAATGAAGCTCATCGTTCAACTCTCTCTTCCCTCTCTCCGCAAAGCACTTACCTCGCTTTCTTCTCGCACTACCCTTGTCGCTTTGGTTTCACACTTTTTCTCAATCGACTCGCTCCTTCTTGCTCAAGAATTCAACATCTTCTCTTGCGTTCTCTACTCTGCAGGAGCTACCTCACTCTCTTTCTCACTTTCTTTTCCAATGCTTGACAAAGAGAGTAATAATAATGGAAATGATGAATTTCTAGACTTAACTAAACCTGTGAAAGTTTCAGGTTGTTCTGTTTCTTTTCAGGTGAAGGATCTTCCTGATCTTATTCACTTTCCAACATCAAGTGAGGTCTACAAATCCTATCTCGATGTATGCAAAGCCCTGTCTCTTGTTGATGTTGTCATTTTGAATAGCTTCAATTCTTTAGAAGGAGACACCATAGCAGCCATACAAAAAGAGAAGACTGGTCCTTTTGTTTATCCCATTGGACCCATTATTCAAACCGAGTCAAGCAATGAAGCGAACAAGTTAGAGTGCGTGAGATGGTTGGAGAATCAACCACCAAAGTCAGTGATTTATATATGCTTTGGGAGTGGTGGAACAATCTCTCATGAACAACTCAATGAGATTGCACATGGCTTAGAGTTAAGTGGCCATAGATTCTTGTGGGTTCTAAGACCCCCAAGCAAAATCTCTGGATCTGGTTATCTTGTAACAAAAAATGATGACCCAGTAGAGTATTTGCCTTCAGGATTCTTGAACAGGACCAAAGGTCAAGGCTTGGTGGTTCCATCATGGGCCCCACAAATTGAGATCCTTGCTCATGGCTCCACCGGTGCTTTCTTGAGCCATTGTGGTTGGAGCTCGGCAATGGAGAGCATCATCCATGGTGTGCCAATTATTGCATGGCCACTGTTTGCAGAGCAGAGAATGAATGCGACATTGTTCACAGATTTGCTCAAGGTGGCACTGAGGCCAGAGCAAGGTGATGCTGATGAAAATGGCATAGTAACAAGAGACCAAGTTGTTAAGGTTATAAAGAGGATCATGGAAAGCGATGAAGGGTTGGAAGTGCGTAAGAGAACAAGAGAGTTGAGTGATGAGGCTTCTCTTGCAATCAAACACAATGGCTCCTCCTACATGGCACTCTCTAGCCTTGCGCAAAAATGGCGCCTGAAGAGCATTGCTTAA	2571	0.4349	MEEEKEKPPTPHIVLVSIPALSHQISILEFAKRLLNLHKEHCFHVTCIIPTLPSQNNNASKPFFFDSLPPNVHCIFLPPVNFDDLRNDPSISLEAQISLAVLHLSKDLELKLKPLSYIYFACSAMLLSLCLHSPNLDQIVPCEFRDYPNLIQIPGCISVHGKNLPNSVQDRSSLAYKLYLQRCKDYFLADGILVNSFMEMEEGAFKALLSQSQEEANPPVYGIGPITQTSGHHXXNNNGWECLKWLDNQPSNSVLYVSFGSGGTLSQEQIKELALGLELSGHRFLWVNVREPNDKAYASYLSNEGADPLSFLPEGFIERTKEKGLILGSWAPQIEVLGHGSVGAFLSHCGWNSVLESVVKGVPMIAWPLFAEQRTNAAMVCIAMVPCPGHGHLIPFIEFAKRFLLHNNNNGVFFHVTILVPTQGPPSSSTIAILNALPSNMDFTFLPSVTMDHLHNPPTHPIPRMKLIVQLSLPSLRKALTSLSSRTTLVALVSHFFSIDSLLLAQEFNIFSCVLYSAGATSLSFSLSFPMLDKESNNNGNDEFLDLTKPVKVSGCSVSFQVKDLPDLIHFPTSSEVYKSYLDVCKALSLVDVVILNSFNSLEGDTIAAIQKEKTGPFVYPIGPIIQTESSNEANKLECVRWLENQPPKSVIYICFGSGGTISHEQLNEIAHGLELSGHRFLWVLRPPSKISGSGYLVTKNDDPVEYLPSGFLNRTKGQGLVVPSWAPQIEILAHGSTGAFLSHCGWSSAMESIIHGVPIIAWPLFAEQRMNATLFTDLLKVALRPEQGDADENGIVTRDQVVKVIKRIMESDEGLEVRKRTRELSDEASLAIKHNGSSYMALSSLAQKWRLKSIA*	857

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo12g0413	856	Gene3D	Glycogen Phosphorylase B;	385	839	-	-
	Amo12g0413	856	CDD	GT1_Gtf-like	11	380	IPR002213	GO:0008194
	Amo12g0413	856	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	11	381	-	-
	Amo12g0413	856	PANTHER	GLYCOSYLTRANSFERASE	10	103	-	-
	Amo12g0413	856	PANTHER	GLYCOSYLTRANSFERASE	104	381	-	-
	Amo12g0413	856	PANTHER	GLYCOSYLTRANSFERASE	380	852	-	-
	Amo12g0413	856	Gene3D	Glycogen Phosphorylase B;	242	384	-	-
	Amo12g0413	856	PANTHER	UDP-GLYCOSYLTRANSFERASE 72B1	10	103	-	-
	Amo12g0413	856	PANTHER	UDP-GLYCOSYLTRANSFERASE 72B1	104	381	-	-
	Amo12g0413	856	PANTHER	UDP-GLYCOSYLTRANSFERASE 72B1	380	852	-	-
	Amo12g0413	856	ProSitePatterns	UDP-glycosyltransferases signature.	726	769	IPR035595	-
	Amo12g0413	856	Pfam	UDP-glucoronosyl and UDP-glucosyl transferase	230	380	IPR002213	GO:0008194
	Amo12g0413	856	Pfam	UDP-glucoronosyl and UDP-glucosyl transferase	634	774	IPR002213	GO:0008194
	Amo12g0413	856	Gene3D	Glycogen Phosphorylase B;	632	834	-	-
	Amo12g0413	856	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	381	848	-	-
	Amo12g0413	856	CDD	GT1_Gtf-like	382	832	IPR002213	GO:0008194
	Amo12g0413	856	Gene3D	Glycogen Phosphorylase B;	113	241	-	-
	Amo12g0413	856	Gene3D	Glycogen Phosphorylase B;	1	112	-	-
	Amo12g0413	856	ProSitePatterns	UDP-glycosyltransferases signature.	330	373	IPR035595	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo12g0413	Amo-Chr12	6749380	6762793	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo12g0413	382	851	Glycosyltransferase	AT1G01420	42.227	5.04e-112	349

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo12g0413	K08237		-	gmx:100775351	478.018