Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0394 ATGGCAAAAGCTGAAAGGTTCGTGGAAGCGGACAATGCAGAAGCCATTATTACCAGAATTGAACACAAATCCCGCAAGATCGAAAGCTTACTCAAGCAGTATAAACCTGTGGAAGCACTTAAAACTGCTCTGGAAGGCACGTATGCCATGACTGGTGATGAGCGTTGCAAGTCAGCACATTGGATTGTGGTACATAGGGCTATAATGGCTATAAAGGATGTGGATGGGATGCTTTCTTCATTGGATCCTGAGTACTATGATATACTAATGAAGTACTTATATAGAGGCTTAGCTACTGGAGATCGTCCCACATGTGACCAATGTCTCCGGATTCATGAAAAGTTGACAGAGAAAGCAGGACTCGGTTGCATTCTACGCTTCCTAACTGATACTGTAAATACTGTTTGA 408 0.4289 MAKAERFVEADNAEAIITRIEHKSRKIESLLKQYKPVEALKTALEGTYAMTGDERCKSAHWIVVHRAIMAIKDVDGMLSSLDPEYYDILMKYLYRGLATGDRPTCDQCLRIHEKLTEKAGLGCILRFLTDTVNTV* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0394 135 PANTHER ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARC 4 133 IPR006789 GO:0005885|GO:0015629|GO:0030833|GO:0034314
Amo12g0394 135 Gene3D - 17 132 IPR036743 GO:0005885|GO:0015629|GO:0030833|GO:0034314
Amo12g0394 135 PANTHER ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 5 4 133 - -
Amo12g0394 135 SUPERFAMILY Arp2/3 complex 16 kDa subunit ARPC5 8 131 IPR036743 GO:0005885|GO:0015629|GO:0030833|GO:0034314
Amo12g0394 135 Pfam ARP2/3 complex 16 kDa subunit (p16-Arc) 9 131 IPR006789 GO:0005885|GO:0015629|GO:0030833|GO:0034314
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0394 Amo-Chr12 6492097 6494818 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0394 K05754 - gmx:100809745 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0394 12 6492097 6494818 Amo12g0394 12 6492097 6494818 ECH