Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0300 ATGGTACTCAGTGGAAACCTGAAGAACGCTGTCATAGCATTCCTGGTTCCTCTTCCTTCCATCATCTTCTACCTCTCATTCCTCGAACATTATGATGACCAGTCAAATTTCTCAACAAAACTTGAACCTTTTTTGTCAACATTGTATTCTTGGTGCTACCACCACCCACTTTTATTGGTCAATGCACTCTTCTTCTTCAACGTCAATGTTCTCTTCTGGATCATAGGCCAATTCCAGCGTAGTCACTGGTTGATTGATCCGTATTGGACAGTTATACCTGTTATGCTTGTTCACTATTATGCAAGTCACCCTTTGGCACAGTTTGATTGGTGGAGGTCTTGGATTGTGGTGACATTGACTTGGATATGGAGTTTAAGGCTCACTCATAACTACTTCAGGAGAGAGAGATGGCAATGGGGTGCGAGGGAGGATTGGCGTTTCACTGAGATGAGCCAGCAGTATGGGAAGCAATGGTGGTGGATTTCATTCTTTGCTGTCTATGTCTCTCAGCAGGTGTTTCTGATTGGATTATCTCTACCCTTAAACATTGTGCACTCTGTCAATAAGCCTTTGAGCATCTGGGACTTGGTCGCCATCGTCGTCTGTTTAAGTGGCATCGTCATAGCATACTTCGCCGATACACAGCTTTATGACTTCGTGATTAGAAACAACAAACTAAAAGGTCTTGGTAAGCCAATGGTGCCTGTCCTTGATAGCGGCTTGTGGCATTACTGTCGCCATCCGAATTACTTCGGCGAGCAGCTGTGGTGGTGGGGATTGGCTCTATTCTCATGGAGCCTCGGATATCGATGGAGCTTTCTTGGTGCATTGGTTAATACCATGTGTTTAGCATATGTGACTAGGCTTGTTGAGGAAAGAATGTTGAGGAAAGAATGGAGAGCAGAATCTTTTAGGGTGTATCAGAAGACAACTTCAGTGTGGGTTCCTTGGCTAAAGTCCTATCCTTCTGCAGCAAAATATAAGAAGAGTGCTTGA 996 0.4428 MVLSGNLKNAVIAFLVPLPSIIFYLSFLEHYDDQSNFSTKLEPFLSTLYSWCYHHPLLLVNALFFFNVNVLFWIIGQFQRSHWLIDPYWTVIPVMLVHYYASHPLAQFDWWRSWIVVTLTWIWSLRLTHNYFRRERWQWGAREDWRFTEMSQQYGKQWWWISFFAVYVSQQVFLIGLSLPLNIVHSVNKPLSIWDLVAIVVCLSGIVIAYFADTQLYDFVIRNNKLKGLGKPMVPVLDSGLWHYCRHPNYFGEQLWWWGLALFSWSLGYRWSFLGALVNTMCLAYVTRLVEERMLRKEWRAESFRVYQKTTSVWVPWLKSYPSAAKYKKSA* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0300 331 Gene3D - 112 318 - -
Amo12g0300 331 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 198 267 IPR001104 GO:0006629|GO:0016627
Amo12g0300 331 PANTHER PHOSPHOLIPID METHYLTRANSFERASE 35 329 - -
Amo12g0300 331 PANTHER 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 35 329 IPR010721 -
Amo12g0300 331 Pfam Protein of unknown function (DUF1295) 72 311 IPR010721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0300 Amo-Chr12 5006729 5009497 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0300 - - lja:Lj3g3v2531230.1 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0300 12 5006729 5009497 Amo12g0300 12 5006729 5009497 ECH