Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0298 ATGGTTTTGAGTAAAAGAAGTGTTTTTGGCACCAATATTGAGATGGGGTTTGGCTTCATGGTTCTGGTTTTGGTGGCCTTATTGTTCAGTTTTAGTCCTATTTGTGTGTTTGGGGAAAAACATGAAAACCCTCAGAACCATAAGAAGCTGAGGTTTGACAAAAATGGAGAATTCAAGATTCTTCAGGTTGCAGATATGCACTATGCTAATGGAAAGTCCACACTCTGCTTGAATGTGTTACCTTCACAGAATGGTTCTTGTTCTGATCTCAACACCACTTCTTTTGTTCAAAGAATGATCCTTGCTGAGAAGCCTAATCTCATTGTCTTCACTGGTGATAATATTTATGGTCGTGATTCCTCGGATTCGGCGAAATCAATGGATGCTGCATTTGCTCCTGCAATTGCATCAAACATTCCTTGGGTAGCTGTTTTGGGAAATCATGACCAAGAAGGATCCTTGTCTAGGGAAGGAGTGATGAAATACATTGTTGGTATGAAGAACACATTGTCTCAATTCAACCCTTCAGAAGTTCACACCATTGATGGTTTTGGAAACTATAACTTAGAAGTTGGAGGAGTTGAAGGCACTGATTTTGAAAATAAATCAGTGCTCAATCTTTACTTCATTGATAGTGGAGATTATTCTAAGGTTCCTTCAATTTCTGGTTACGATTGGATCAAGCCATCACAGCAACTCTGGTTCCAACGAACATCCGAAAAGCTCCAGAAAGCATACAAAAGTGGACCAATGCCTCAGAAAAACTCTGCTCCTGGTCTTGCATACTTTCATATACCATTGCCTGAGTATGCTAGTTTTGATAAATCAAACTTCACAGGTGTCAAACTTGAACCAGATGGCAATGGCATTAGTTCTGCTAAGGTGAACTCCGGCTTCTTCGCGACGTTAGTCCAAGCCGGAGATGTGAAGGCAGTTTTCACCGGCCATGATCACCTCAATGACTTCTGTGGTAAGTTAACCGGCATAAACCTATGTTATGCCGGAGGATTCGGATACCATGCATATGGAAAGGCTGGATGGTCTAGGAGATCAAGAGTGGTGGTAGCTCGCTTGGAGAAGACGCCGGAAGGAGCTTGGGGAGATGTCAAGTCAATAAATACCTGGAAACGCCTCGACGATCAAAATTTTACTCAAATTGATGGACAAGTCCTTTGGAGCAGGAGCTTTGGAAGACAACACAGACACAACCAAAAACACAAATAG 1224 0.4191 MVLSKRSVFGTNIEMGFGFMVLVLVALLFSFSPICVFGEKHENPQNHKKLRFDKNGEFKILQVADMHYANGKSTLCLNVLPSQNGSCSDLNTTSFVQRMILAEKPNLIVFTGDNIYGRDSSDSAKSMDAAFAPAIASNIPWVAVLGNHDQEGSLSREGVMKYIVGMKNTLSQFNPSEVHTIDGFGNYNLEVGGVEGTDFENKSVLNLYFIDSGDYSKVPSISGYDWIKPSQQLWFQRTSEKLQKAYKSGPMPQKNSAPGLAYFHIPLPEYASFDKSNFTGVKLEPDGNGISSAKVNSGFFATLVQAGDVKAVFTGHDHLNDFCGKLTGINLCYAGGFGYHAYGKAGWSRRSRVVVARLEKTPEGAWGDVKSINTWKRLDDQNFTQIDGQVLWSRSFGRQHRHNQKHK* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0298 407 Pfam Calcineurin-like phosphoesterase 58 319 IPR004843 GO:0016787
Amo12g0298 407 PIRSF Ptase_At2g46880 14 392 IPR011230 -
Amo12g0298 407 PANTHER PHOSPHOESTERASE, METALLO-DEPENDENT PHOSPHATASE-LIKE PROTEIN-RELATED 21 395 - -
Amo12g0298 407 SUPERFAMILY Metallo-dependent phosphatases 54 349 IPR029052 -
Amo12g0298 407 Gene3D - 81 407 IPR029052 -
Amo12g0298 407 PANTHER - 21 395 - -
Amo12g0298 407 CDD MPP_Dcr2 56 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0298 Amo-Chr12 4978119 4982940 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0298 - - gmx:100783020 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0298 12 4978119 4982940 Amo12g0298 12 4978119 4982940 ECH