Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0296 ATGGGTGCGAAAAGGAAGAAGAGGAGCAAGGGTTCCGATAGTGACGAAGATGATGAGAGAGATTCACCGCCACCAAAGAAGCAAGGAGCTTCTGCTTCCTCCGATTCCAATTCGATTAAGCAGAAATCGAAGAAGGAGATACTTCCTTCGATGATAAAGAACAAGGAGAAGAGATCTGAGATCCATGCCAAGCTCAAACGCCAGAAGAAGCTTGAGAAGCGCAACAAGCTCAAGGAACGCCAAGCCGCTGAGAAAAGAGCTCTTGAGCTCGGCGAAGAGCCTCCAGAGAAGAAGGTTCCACGCACCATCGAGAACACCAGGGAATTCGACGAGACTGTTTGCATGCCCGACGATGAAGAGTTATTTGCAGGAAATGATGCTGATGAGTTCAGTAAAATTTTGAGCCAGCAACAAACTCCAAAGATATTAATCACCACTTGCCGTTTCAATTCTTCGAGGGGACCTGCTTTTATATCAGAATTGCTTTCTGTTATACCAAATGCACATTACTTCAAGAGAGGAACCTATGATTTAAAAAAGATTGTAGAATATGCAAAGAAAAAGGACTTCACTTCTATGATAGTTGTTCACACCAATCGCCGGGAGCCAGATGCTCTCTTAATCATTGGATTGCCTGATGGACCTACTGCTCACTTCAAGCTTTCAAAGCTTGTTTTGCGCAAGGATATAAAGAATCATGGAAATCCAACCAGTCACAAGCCTGAGCTTGTGTTCAATAACTTCACAACGCGTTTGGGGCATCGAGTTGCAAGATTGATACAGTCACTTTTCCCACAAGAACCAGAATTTAAAGGCCGACGAGTGGTTACGTTCCACAATCAGAGAGACTTCATATTCTTCCGACATCATCGGTATATCTTTGAAACCAAAGAAATTAAAAAGACTGATACTAAAGGTAAAAAGGACGAAAAGGGGACAAATGAGAAAGTTCCTGATCACAAAACAATAGCTCGTCTTCAGGAATGTGGCCCTCGTTTCACATTGAAATTGATCAGCCTGCAGCATGGAACATTTGACTCCAAGGGAGGAGAATATGAGTGGGTTCATAAGCCGGAAATGGATACAAGTCGGAGGAGGTTTTTCCTATAG 1110 0.4333 MGAKRKKRSKGSDSDEDDERDSPPPKKQGASASSDSNSIKQKSKKEILPSMIKNKEKRSEIHAKLKRQKKLEKRNKLKERQAAEKRALELGEEPPEKKVPRTIENTREFDETVCMPDDEELFAGNDADEFSKILSQQQTPKILITTCRFNSSRGPAFISELLSVIPNAHYFKRGTYDLKKIVEYAKKKDFTSMIVVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDIKNHGNPTSHKPELVFNNFTTRLGHRVARLIQSLFPQEPEFKGRRVVTFHNQRDFIFFRHHRYIFETKEIKKTDTKGKKDEKGTNEKVPDHKTIARLQECGPRFTLKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0296 369 Pfam Brix domain 151 338 IPR007109 GO:0006364|GO:0019843
Amo12g0296 369 Coils Coil 54 93 - -
Amo12g0296 369 MobiDBLite consensus disorder prediction 1 25 - -
Amo12g0296 369 MobiDBLite consensus disorder prediction 75 98 - -
Amo12g0296 369 PANTHER RIBOSOME PRODUCTION FACTOR 1 41 369 - -
Amo12g0296 369 Gene3D - 140 336 - -
Amo12g0296 369 SUPERFAMILY Class II aaRS ABD-related 140 343 - -
Amo12g0296 369 SMART Brix_2 143 340 IPR007109 GO:0006364|GO:0019843
Amo12g0296 369 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 41 369 IPR044281 GO:0006364|GO:0042134
Amo12g0296 369 ProSiteProfiles Brix domain profile. 140 346 IPR007109 GO:0006364|GO:0019843
Amo12g0296 369 MobiDBLite consensus disorder prediction 39 61 - -
Amo12g0296 369 MobiDBLite consensus disorder prediction 1 98 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0296 K14846 - gmx:100785331 571.622