Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0281 ATGAGTGAGAAGGGTGAAGCAGCAAAAGAAAGCCGTCCGGCTCCACGCTTGAACGAAAGGATTTTGTCATCTTTGTCACGCAGATCAGTTGCTGCACACCCTTGGCATGATCTTGAAATTGGCCCTTCAGCCCCACAAATAGTCAACTGTGTAGTGGAAATCCCAAAAGGAAGCAAAGTCAAATATGAACTTGACAAAAAAACTGGATTAATTAAGGTTGATCGAGTTTTATATTCATCAGTTGTGTATCCTCATAACTACGGTTTCATTCCTCGTACTCTGTGTGAAGACAATGATCCTCTTGATGTCTTGGTCCTCATGCAGGAGCCAGTTCTTCCTGGTTGTTTTTTGAGAGCTAAGGCCATTGGATTAATGCCCATGATTGATCAGGGAGAGAAGGATGATAAAATCATTGCTGTATGTGCTGATGATCCGGAGTATAAGCACTACACCGACATCAAAGAACTTCCGCCTCATCGCCTCTCTGAGATCCGTCGCTTCTTCGAAGACTACAAGAAGAATGAGAACAAGGAGGTGGCAGTTAATGAGTTTTTGCCGGCATCCGCAGCAGTTGAAGCCATCCAGTACTCAATGGATCTCTATGCTGAGTACATTATGCAGACCTTGAGGAGATAA 636 0.4403 MSEKGEAAKESRPAPRLNERILSSLSRRSVAAHPWHDLEIGPSAPQIVNCVVEIPKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDIKELPPHRLSEIRRFFEDYKKNENKEVAVNEFLPASAAVEAIQYSMDLYAEYIMQTLRR* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0281 211 Hamap Inorganic pyrophosphatase [ppa]. 46 202 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Amo12g0281 211 SUPERFAMILY Inorganic pyrophosphatase 27 208 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Amo12g0281 211 Gene3D Inorganic pyrophosphatase 29 207 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Amo12g0281 211 Pfam Inorganic pyrophosphatase 50 201 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Amo12g0281 211 PANTHER BNAC07G03580D PROTEIN 16 211 - -
Amo12g0281 211 CDD pyrophosphatase 46 199 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Amo12g0281 211 ProSitePatterns Inorganic pyrophosphatase signature. 97 103 - -
Amo12g0281 211 PANTHER INORGANIC PYROPHOSPHATASE 16 211 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0281 Amo-Chr12 4573739 4575782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0281 K01507 - gmx:100781974 390.963