Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0185 AAAATTTATGGAAAACAAAAAAAGATAATTAAAAAAAAAAAAAAGAAAACCCCAAAAACTGAAACCCCTCTGTCGACCTCTCTCACTCTGCAGCGCTGCCTCGTCGTCGCCGTTCTCTGGTTTGGTCACCGGTGCCGGTGGCCGTTGCGGAGTCTGTTCGCTCTTGACAACCTTCTAATGGCAAGAGTGAAGCATATTCCAACACCTAGTCAAAAAGGTAAGAAAAAAGTAAGACCATCACAATCTCCATCGCCATCGCAAGCGTCTGGTAGCAGAAGGAGGGAAGATGGAGAAGAGGAGCAGGAACCAGAAGCAGGACGACGATCAGCAGCACCTAAGAAAAGGCGTAATAAGCCAGGAACAGTAGCTCTTCGTGAGATTCGTAAATTTCAGAAGAGTTTCAACCTACTCATCCCAGCTGCCCCCTTCATGAGATGTGTCAAACAGATTACAAACCAACTATCTACGGAGGTCAATCGCTGGACAGCTGAAGCCATGGTAGCACTTCAAGAAGCAGCTGAGGATCATCTGGTTCGTTTGTTTGAAGATGGAATGTTGTGTGCTATCCATGCAAAGCGTGTTACTCTAATGAAAAAGGACATAGAGTTGGCCCGGAGACTCGGAGTGATAGGAAGACCTTGGTGA 645 0.462 KIYGKQKKIIKKKKKKTPKTETPLSTSLTLQRCLVVAVLWFGHRCRWPLRSLFALDNLLMARVKHIPTPSQKGKKKVRPSQSPSPSQASGSRRREDGEEEQEPEAGRRSAAPKKRRNKPGTVALREIRKFQKSFNLLIPAAPFMRCVKQITNQLSTEVNRWTAEAMVALQEAAEDHLVRLFEDGMLCAIHAKRVTLMKKDIELARRLGVIGRPW* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0185 214 MobiDBLite consensus disorder prediction 74 90 - -
Amo12g0185 214 MobiDBLite consensus disorder prediction 91 110 - -
Amo12g0185 214 MobiDBLite consensus disorder prediction 1 25 - -
Amo12g0185 214 PANTHER HISTONE H3-LIKE CENTROMERIC PROTEIN HTR12 72 214 - -
Amo12g0185 214 Pfam Core histone H2A/H2B/H3/H4 91 207 IPR007125 GO:0003677
Amo12g0185 214 SMART h35 109 212 IPR000164 GO:0000786|GO:0003677|GO:0030527
Amo12g0185 214 MobiDBLite consensus disorder prediction 66 122 - -
Amo12g0185 214 Gene3D Histone, subunit A 61 209 IPR009072 GO:0046982
Amo12g0185 214 PANTHER HISTONE H3 72 214 IPR000164 GO:0000786|GO:0003677|GO:0030527
Amo12g0185 214 MobiDBLite consensus disorder prediction 1 18 - -
Amo12g0185 214 SUPERFAMILY Histone-fold 81 207 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0185 Amo-Chr12 2729707 2733218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0185 K11253 - gmx:100811872 184.496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0185 12 2729707 2733218 Amo12g0185 12 2729707 2733218 ECH