Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0178 ATGAAGAATTTGCAGAGTACAGAGGAATTGCAGTCACCAACTCAAGCATCTCATGAGCCGAAGAGTGAACCACCAAACAATCACACAAGTGATGCTCCCGTTGCCGACTCAGGTTCGGCATCCGCCTCGAGCAATGATAACAAGAAAGTTTCGCGGCAGGATATCGAGCTTGTCCAAAATTTAATAGAAAGGTGCCTACAATTATATATGAACAAAGATGAAGTGGTCAAAACACTACTGACTCGTGCTAAGATAGATCCTGGATTTACAACTCTCGTTTGGCAGAAGTTAGAGGAAGAGAATGCCGATTTCTTCAGGGCGTACTACATCAGGCTTAAATTGAAAAAGCAAATACTCCTGTTTAATCATTTGCTTGAGCATCAGTATCATCTGATGAAGGGTCCCATGGCAGCAAAGGTTCCATTGGCTCCAATACAGAATGGAATCCATCCAATGCCTGTTAACAACCTACCTATGGGATATCCAGTGCTACAACAGCCTCCGATGGCAGCTGCGGGTCAACCTCATATGGACTCTATGGGTATATCGAGCTGCCATGTGGTTAACGGAGTCCCTGCGCCGAGCAATTTTCATCCCATGCGGATGAATTCCGGAAATGATATGGTGATGGACCACAGTGGTCCCGAGATGGCGCCGGTTGCTCCACCGAATGGTGCAATGTCATCAGTGTCCGACATGCCGGTGAGTCCAACATCTGTAGCATCCACCGGCCATTTCCCCTTCACTGCATCAGAGATATCAGGAATGGGCACGGATACATCGGCTCTTGACACAGCTTTTACATCGGATGTCGCTACTTCGGTAGGGCTACAGCTTGCGGCAGACGGTGGTGCCGGAATCTCGAGATCACTTGATCAAATTCAGTGGAATTTTAGCCTGTCTGATCTAACAGCTGATTTGCCAAACTTGGGAGATCTAGGAGCTTTGGGAAATTATCCCGGTTCACCATTTTTGCCATCTGATTCAGACATTTTGCTAGAATCTCCAGACCAACAGGATATAGTGGATGACTTCTTTGTTAATTCTGAGCCACCATGCTCCCAATCAGATGAGGAGAAATCTTAA 1086 0.4659 MKNLQSTEELQSPTQASHEPKSEPPNNHTSDAPVADSGSASASSNDNKKVSRQDIELVQNLIERCLQLYMNKDEVVKTLLTRAKIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQILLFNHLLEHQYHLMKGPMAAKVPLAPIQNGIHPMPVNNLPMGYPVLQQPPMAAAGQPHMDSMGISSCHVVNGVPAPSNFHPMRMNSGNDMVMDHSGPEMAPVAPPNGAMSSVSDMPVSPTSVASTGHFPFTASEISGMGTDTSALDTAFTSDVATSVGLQLAADGGAGISRSLDQIQWNFSLSDLTADLPNLGDLGALGNYPGSPFLPSDSDILLESPDQQDIVDDFFVNSEPPCSQSDEEKS* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0178 361 MobiDBLite consensus disorder prediction 1 48 - -
Amo12g0178 361 Pfam Plant protein 1589 of unknown function (A_thal_3526) 58 109 IPR006476 -
Amo12g0178 361 PANTHER OS02G0137100 PROTEIN 1 361 IPR006476 -
Amo12g0178 361 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 55 111 IPR006476 -
Amo12g0178 361 MobiDBLite consensus disorder prediction 1 50 - -
Amo12g0178 361 PANTHER HELICASE WITH ZINC FINGER PROTEIN 1 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0178 Amo-Chr12 2643592 2649149 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0178 - - gmx:100809202 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0178 12 2643592 2649149 Amo12g0178 12 2643592 2649149 ECH