Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0168 ATGGAGGAGGTGGTGCCGGGGGATCCGGCGGCAGACCTCATGATGAGTTACGGTTCGGATAGCTCCACTGGCTGTAATGGACAGGAGGATTTTGGGGGTTATGGATTGAATGAGGAGGGGGATTCAGAGAGAACAGTTACGCAGGAAATTGCCGTTTGTGAAGGTGAGGTGTTTAATGGGACTACAAGGATAAGGGGTGTGAATGGATTGGGCTTCTCTTATATTGAACAAACTAAGGAAGGTTATGAAGATGAGGGTGGTCTGGGCTTGGTGTTAAAGGGCCCAATTGTCAAAGGAAAGGAAGGTGGGCTGCGGATTGGGGAGAAAACACAAAGGGATTGGGCTGATGTGGATGAGGCTGGTCAGGATCAGTTGTGGAGAGCAATTGGGTCGGGTGATGAACCGGGTAGGGATGGAGGATATCGGGTCAACCAGATTGCTGGGAAGAGCACGCTGCAGCCAAAGGAAATGGGAACGCAAGGAGTGCGAGACTACCCAGACGCACGAGGGGTGGAGGCTGTAGGTGCAAGAAGGGATGCGTTGATCAGTCAGGGCTTTAGGGCGGTTGAGGCACGTAGCTCCATGGCTGGGGCGGGCCGCGACGACCAACAGAGGGCTAAGTCCGGTGATGTTGGGCAGGGGAGAACGCGGCAGTTGGAGAGGATAAGGGAGCCGCCGGAACCGGAAGAAGAGGGACATGCATATCTCTCTTCTGGAAACCGATCGAGAAACCCGGCGCAGGTGGATGAGGGGCCGCGAGTTTCGGGACCAGCTGCATGGATAGGCACGGTGGGAGAAGATGTGGCTAATGGAGAGGGAAATGATCATGGAAGCAGTGGTTTTGCATCATCAGTAAATACTTGCAAGAACACAAATTATCAAAGTTTTCTGCCTCCTCCATACCAGAATATATCCAATATGATATGCACACCTGTATGGCATACATATGAATTGAGGTATCTTCAAAATGATCAAACAACAACTATCATATTATCTGCTCCCTACACTCTAGGATGGGTTGGAATTGGATTTTCAAAAGATGCCATGATGGTTGGTTCAAGTGTGATGGTTGGATGGATTAACAAACACGGCCACTCGAAAATCAAGCAGTTTTACTTGCGCGCCAAGAAACCGTCAGAAGTCTTAGAAGACAAAGGTGAACTGCCACTAAATAATTTGCCTGCAGCAGTGGCAACCAATGGAGCTGAAATTCATTTGGCTTTCCAGTTGAAGATGGAAATTCCATTGGAGAGGCAACAAGTTCTTTTGGCTTTTAGTGTTAAATATCCCAAGAACAATAACCATCTTTCCAAGCATGATGACAAAACATCTTTTGTATTTGATTTTACTTCAGATTCTAAGGGCCCTTTACCATCATCCAATGAGTTGATTCAGATGAGGAAGAACCATGGAATTGTAGGTATAATAGGATGGGGTCTAATCCTACCTATGGGGGTGATCATTGCTAGATACTTCAGGCATAAAGATCCTCAGTGGTTCTATCTTCATGCAGCCATTCAATTTGTTGGATTCACATTTGGTCTTGTTACAATCATTCTTGGATTGCAACTCTACACCAAGATGAATGCTCATATACCAGCTCACAGAGGCATAGGCATTTTTGTCTTTGTACTAAGCATTCTTCAGATATTGGCATTATTTTTGAGACCAAACAAGGATTCAAACATTCGAAGAATCTGGAATTTGTACCACAATTGGTTTGGAAGGTTGGCAATGTTATTTGCAACCATGAACATAGTGTTGGGAATACAAGCTGCTGGGGCAGGAAAAGAATGGAAGATAGGCTATGGATTCCTTTTTGGTATAACAGTTGTTGTAGCCATTGTTCTTGAAGTATTAGCATATTTGAGAAGACAAGAGATGAAATCTTTGCCTCCAAACTTCCAAATAGACCCTTTTAGAGGAAAATCTACATTTCCAACTCATCTTTAG 1953 0.4542 MEEVVPGDPAADLMMSYGSDSSTGCNGQEDFGGYGLNEEGDSERTVTQEIAVCEGEVFNGTTRIRGVNGLGFSYIEQTKEGYEDEGGLGLVLKGPIVKGKEGGLRIGEKTQRDWADVDEAGQDQLWRAIGSGDEPGRDGGYRVNQIAGKSTLQPKEMGTQGVRDYPDARGVEAVGARRDALISQGFRAVEARSSMAGAGRDDQQRAKSGDVGQGRTRQLERIREPPEPEEEGHAYLSSGNRSRNPAQVDEGPRVSGPAAWIGTVGEDVANGEGNDHGSSGFASSVNTCKNTNYQSFLPPPYQNISNMICTPVWHTYELRYLQNDQTTTIILSAPYTLGWVGIGFSKDAMMVGSSVMVGWINKHGHSKIKQFYLRAKKPSEVLEDKGELPLNNLPAAVATNGAEIHLAFQLKMEIPLERQQVLLAFSVKYPKNNNHLSKHDDKTSFVFDFTSDSKGPLPSSNELIQMRKNHGIVGIIGWGLILPMGVIIARYFRHKDPQWFYLHAAIQFVGFTFGLVTIILGLQLYTKMNAHIPAHRGIGIFVFVLSILQILALFLRPNKDSNIRRIWNLYHNWFGRLAMLFATMNIVLGIQAAGAGKEWKIGYGFLFGITVVVAIVLEVLAYLRRQEMKSLPPNFQIDPFRGKSTFPTHL* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0168 650 CDD DOMON_DOH 315 376 IPR045266 -
Amo12g0168 650 PANTHER MEMBRANE PROTEIN-LIKE 285 637 - -
Amo12g0168 650 CDD Cyt_b561_FRRS1_like 444 619 - -
Amo12g0168 650 Pfam DOMON domain 320 385 - -
Amo12g0168 650 ProSiteProfiles DOMON domain profile. 314 426 IPR005018 -
Amo12g0168 650 SMART 561_7 469 590 IPR006593 -
Amo12g0168 650 Gene3D - 445 630 - -
Amo12g0168 650 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 285 637 - -
Amo12g0168 650 ProSiteProfiles Cytochrome b561 domain profile. 433 626 IPR006593 -
Amo12g0168 650 MobiDBLite consensus disorder prediction 1 24 - -
Amo12g0168 650 SMART DOMON_3 339 426 IPR005018 -
Amo12g0168 650 MobiDBLite consensus disorder prediction 203 236 - -
Amo12g0168 650 MobiDBLite consensus disorder prediction 193 259 - -
Amo12g0168 650 Pfam Eukaryotic cytochrome b561 470 591 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0168 Amo-Chr12 2500476 2508473 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0168 - - ahf:112729545 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0168 12 2500476 2508473 Amo12g0168 12 2500476 2508473 ECH