Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0120 ATGAAAATGGCAAACTTATTAGTCATCTCATTTATGCTTTGTCTAGGTATGTTATCTACTACTATCTACAATGTGAAACTCATTGCTTGTGCAAGTTCCAATGGAATATCAACAAGGTTCTATGATTTCAAGGTACAAACTAAAAGAGTTACCAAACTTTGTAACACCAAGGATATTGTCACAATCAATGGCAAGTTTCCAGGACCTGTAGTTTATGCACAAGAAGATGATAGAATCATAGTCAAAGTTACCAATAAGACACCCTTCAATATCACAATTCACTGGCATGGTATCCGGCAACAGTTATCGTGTTGGTACGATGGGCCGTCCTATATCACGCAGTGCCCGATTCAATCAGGACAAAGTTTCACCTATAATTTTACAGTGGCAAAGCAGAAGGGGACCTTCTTTTGGCATGCACATGTTTCTTGGCTAAGAGGCACAGCTTATGGTGCAATGGTTGTTTATCCTAAGGCCAATGTTCATTACCCTTTTAAGAATCCGTATCAAGAGCACATAATCTTATTAGGAGAATATTGGATAAAGGATCTCCAAGAAATTGAGCATTCAACTCTAGCAAGTGGAGGAGCTCCTCCTAGAGCAGATGCATTCACCATTAATGGTCATCCAGGCCCCAACTATAATTGCTCCACTAATGATGTCTATCAACTTGATGTGGTTCCTAGGAAGACATATTTGTTGAGGCTGATCAATGCTGGTTTAAACACTGAGAATTTCTTTGCCATTGCAAATCACAAACTAACAATTGTGGAAGCTGATGCTGAGTACACGAAGCCGTTCACCACGGACACGGTGATGTTAGGACCAGGCCAAACATTGAATGTCCTTGTCACTGCTGATCAACCCGTAGGGAAATACTCCATGGCTGTGGCGCCTTACAAATCAGGAAGAATTGTTCATTATCAAAACGTTTCAGCAATTGCTTGCTTAAACTATTTAGGAGCTGCATCTAATAGCTTATATTTGCCAGCTAAATTACCCAAACTCGACGATAAACTTGCCGTTAAGACAGTCATGGATGGATTAAGGAGCCTAAACCAAGTCGATGTCTTCAAAGAAATTGATAAAAACCTATTCATCACCATTGGATTGAATGTTCAAAAATGCCATTCAAAGACACCGAAGAAGAACTGCCAAGCCATGAATAACGGGGTGCTGGCAGCTTCGATGAACAACATAAGTTTTGTTAATCCGAATATTTCAATCCTGGAAGCATACTATAAGAATAAAAAAGGATCATATACCGAAGATTTTCCTGACAGACCATCTAAGTTCTACAACTTTGTCAATGGCGCACCTAATAACATTCCGCATGACACACAGTCATTGAATGGGACTAGAACAAAAGTCCTTGAGTATGGTAGCAAGGTGCAACTCATTTTCCAGGACACTGGAACAGTAAACATTGAGAACCACCCAATGCATTTCCATGGCCACAGTTTCTATGTTGTAGGCTATGGTACAGGAAATTATAACCCTCAAACTGCGAAATTCAACTTAGTCGATCCTCCGTACATGAGTACGATTGGAGTTCCGGTTGGTGGATGGGCAGCAATTCGCTTTGTCGCCAATAATCCAGGCGTCTGGTATATGCATTGCCACATTGATATACACCAATCATGGGGGCTAGGCATGTCTGACTGGAACATTCTGGTCAGTCCTGCCTCCTATACTCAAAACATGCAATGA 1710 0.4088 MKMANLLVISFMLCLGMLSTTIYNVKLIACASSNGISTRFYDFKVQTKRVTKLCNTKDIVTINGKFPGPVVYAQEDDRIIVKVTNKTPFNITIHWHGIRQQLSCWYDGPSYITQCPIQSGQSFTYNFTVAKQKGTFFWHAHVSWLRGTAYGAMVVYPKANVHYPFKNPYQEHIILLGEYWIKDLQEIEHSTLASGGAPPRADAFTINGHPGPNYNCSTNDVYQLDVVPRKTYLLRLINAGLNTENFFAIANHKLTIVEADAEYTKPFTTDTVMLGPGQTLNVLVTADQPVGKYSMAVAPYKSGRIVHYQNVSAIACLNYLGAASNSLYLPAKLPKLDDKLAVKTVMDGLRSLNQVDVFKEIDKNLFITIGLNVQKCHSKTPKKNCQAMNNGVLAASMNNISFVNPNISILEAYYKNKKGSYTEDFPDRPSKFYNFVNGAPNNIPHDTQSLNGTRTKVLEYGSKVQLIFQDTGTVNIENHPMHFHGHSFYVVGYGTGNYNPQTAKFNLVDPPYMSTIGVPVGGWAAIRFVANNPGVWYMHCHIDIHQSWGLGMSDWNILVSPASYTQNMQ* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0120 569 PANTHER MULTI-COPPER OXIDASE 21 554 IPR045087 -
Amo12g0120 569 SUPERFAMILY Cupredoxins 38 180 IPR008972 -
Amo12g0120 569 SUPERFAMILY Cupredoxins 359 551 IPR008972 -
Amo12g0120 569 ProSitePatterns Multicopper oxidases signature 2. 539 550 IPR002355 GO:0005507
Amo12g0120 569 CDD CuRO_3_LCC_plant 421 552 IPR034289 GO:0005507
Amo12g0120 569 Gene3D - 169 354 IPR008972 -
Amo12g0120 569 SUPERFAMILY Cupredoxins 165 316 IPR008972 -
Amo12g0120 569 CDD CuRO_2_LCC_plant 172 319 IPR034285 -
Amo12g0120 569 PANTHER LACCASE-6 21 554 - -
Amo12g0120 569 CDD CuRO_1_LCC_plant 41 157 IPR034288 GO:0005507
Amo12g0120 569 Pfam Multicopper oxidase 445 552 IPR011706 GO:0005507|GO:0016491
Amo12g0120 569 Pfam Multicopper oxidase 171 321 IPR001117 -
Amo12g0120 569 Gene3D - 25 157 IPR008972 -
Amo12g0120 569 Pfam Multicopper oxidase 45 159 IPR011707 GO:0005507
Amo12g0120 569 TIGRFAM laccase: laccase 38 553 IPR017761 GO:0046274|GO:0048046|GO:0052716
Amo12g0120 569 Gene3D - 374 567 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0120 Amo-Chr12 1743839 1746859 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0120 K05909 - gmx:100789406 962.985