Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g0002 ATGGCAAATAGTTCAGCCAACACTATTGCTACTTTTCCACCAGTGGAAAAATGTAACTCTATAGGGAGAGAAAACCACACTATTGTGGCAGACATGGATGGAACTTTGCTCATAGGGCGAAGTTCCTTCCCATACTTTGCCCTAATCGCCTTTGAGGTCGGTGGGTACCTAAGGCTCCTCTTCTTTCTCTTGGCATCCCCCTTGGCTGCCATTCTATACCACTTTGTCTCCGAGTCTGCGGGAATTCAATCCGTAGCCCGTGCTGTGCTCCCCAAATTTTACTCTGAGGACCTCCATCCGGAGACATGGCGCGTGTTTTCGTCGTGCGGACGAAAGTACGTCCTCACGGCAAATCCACGGGTGATGGTAGAGCCATTTTTGAAGGAGATGTTGAGTGCGGACATGGTTTTGGGGACAGAGTTAGGAAGTTATAAGGGAAGAGCAACCGGACTTGTTCGCAAGCCTGGAGTTCTTGTTGGAAAAAATAAAGAGGATGTACTAAAACAAACCTTTGGTGATGAGAGACCAGATATTGGACTTGGAGATAAACTCAGTGATGCTCCTTTCATGGCTCTGTGCAAGGAAGCATATATTGTCCTTCCAAAACCAAAATTGAAGGCAGTGCCAAGTGGGAAGCTTCCAAAACCCATAATATTTCATGATGGAAGGCTTGTCCAAAAGCCAACACCTCTGAATGCATTGCTAACACTCCTTTGGATCCCTTTAGGGTTTCCCTTAGCCTGCCTCCGCTTGGCTGCCGCAACTCTCCTCCCTATGTCACTTGCCTACTATGCTTTATGGCTCCTCGGCGTTTATGTCACCGTCAAAGGAACGCCACCTCCGCCAGCAAATAAATCCAACTGCCAAGGTGGTGTCCTCTTCGTATGCAACCATAGAACCATGACTGACCCTGTTTTCCTCTCCATAGCTCTTGGTCGCCCTATACCGGTGGTAACCTACTCAATCTCCCGCTTCTCAGAGATAATCGCACCGATCAAGACAGTTAGGTTAAGACGCGACCGATCCGCAGATGCTTCAATGATTAAGAAGCTTCTACAAGAGGGTGACCTTGTAATTTGCCCCGAAGGGACAACTTGTAGGGAACCTTTCCTTCTAAGGTTTTCGGCCTTGTTCGCCGAGTTGACCGACGAATTGGTGCCAGTGGCAATGGTGAATAGGATGAGCATGTTCCATGGAACAACTGCTAGAGGGTGGAAAGGGATGGATCCACTCTTCTTACTCATGAACCCTAACCCAGCTTATGAGATAACGTTCTTGAACAAGTTGCCTAAGGAGTTGACTTGCGGGTCAGGTCGGAAAATGAGCATTGATGTAGCCAATTATATTCAGAGCCTCATTGCTGAAACATTGTCATATAAATGCACAAGCTTCACTAGGAAAGACAAGTATAAGGCTCTTGCTGGTAATGATGGAACTGTCCCTATTGACAAAAACCCTATTCTTAAGGCCAACAAAATCATGGGTTGCTAA 1491 0.4702 MANSSANTIATFPPVEKCNSIGRENHTIVADMDGTLLIGRSSFPYFALIAFEVGGYLRLLFFLLASPLAAILYHFVSESAGIQSVARAVLPKFYSEDLHPETWRVFSSCGRKYVLTANPRVMVEPFLKEMLSADMVLGTELGSYKGRATGLVRKPGVLVGKNKEDVLKQTFGDERPDIGLGDKLSDAPFMALCKEAYIVLPKPKLKAVPSGKLPKPIIFHDGRLVQKPTPLNALLTLLWIPLGFPLACLRLAAATLLPMSLAYYALWLLGVYVTVKGTPPPPANKSNCQGGVLFVCNHRTMTDPVFLSIALGRPIPVVTYSISRFSEIIAPIKTVRLRRDRSADASMIKKLLQEGDLVICPEGTTCREPFLLRFSALFAELTDELVPVAMVNRMSMFHGTTARGWKGMDPLFLLMNPNPAYEITFLNKLPKELTCGSGRKMSIDVANYIQSLIAETLSYKCTSFTRKDKYKALAGNDGTVPIDKNPILKANKIMGC* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g0002 496 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 203 479 - -
Amo12g0002 496 PANTHER ANCIENT UBIQUITOUS PROTEIN 10 486 - -
Amo12g0002 496 CDD LPLAT 263 454 - -
Amo12g0002 496 SMART plsc_2 292 393 IPR002123 GO:0016746
Amo12g0002 496 Pfam haloacid dehalogenase-like hydrolase 28 190 - -
Amo12g0002 496 Pfam Acyltransferase 289 385 IPR002123 GO:0016746
Amo12g0002 496 Gene3D - 100 211 IPR023214 -
Amo12g0002 496 SUPERFAMILY HAD-like 27 195 IPR036412 -
Amo12g0002 496 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE RAM2 10 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g0002 Amo-Chr12 71505 74467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo12g0002 12 485 Acyl Lipid Metabolism Gene Families AT2G38110 54.251 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g0002 - - gmx:100818246 757.673