Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2311 ATGAGCTCCTCGCCCCATCGTTCTCGCGGCGGCAACGGGAACGGAGACGGTGGAGATAATAGGCCGAGATTCTTCGACGCAAAAACGAAGATCAAGTGCTGGAACAACGCCGAAATCGTTCCCGGCCGCCACCCTGAGAGGTGGCGCAAAGACGCCGCTGGCAACATTGTTTGCAAGCGCTTCAAAGACTGCCTCGGCTGCCTCTGCTACGAGTACGATCACATCGTCCCCTTCTCCAAAGGGGGTGAATCCACTGAAGAAAATTGTCAGATACTTCAGTCAAGAGTGAACAGATTCAAATCAAATAAATATCAGGTTGATGCTGATCAACTCAAAGGATACTCTTGTGATGTTATCTTTACTGACAAGGAGCTCGACATAATCGAGATGGCTGTTTATGGCGATGTTATCCGGCCAGGAAACCAGTGCCGTTGCAGAACTGTTGCCGAGATGCTTGGCAAATACAAGTCTAAAGATGAGACAACTGCATGCAAGTTGCCATAG 504 0.496 MSSSPHRSRGGNGNGDGGDNRPRFFDAKTKIKCWNNAEIVPGRHPERWRKDAAGNIVCKRFKDCLGCLCYEYDHIVPFSKGGESTEENCQILQSRVNRFKSNKYQVDADQLKGYSCDVIFTDKELDIIEMAVYGDVIRPGNQCRCRTVAEMLGKYKSKDETTACKLP* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2311 167 Pfam HNH endonuclease 71 94 IPR002711 GO:0003676|GO:0004519
Amo11g2311 167 PANTHER F6A14.21 PROTEIN 18 167 - -
Amo11g2311 167 Gene3D - 34 116 - -
Amo11g2311 167 SMART HNH_5 52 98 IPR003615 -
Amo11g2311 167 MobiDBLite consensus disorder prediction 1 22 - -
Amo11g2311 167 PANTHER HNH ENDONUCLEASE 18 167 - -
Amo11g2311 167 CDD HNHc 59 98 IPR003615 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2311 Amo-Chr11 124208834 124210999 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2311 - - ahf:112722534 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2311 11 124208834 124210999 Amo11g2311 11 124208834 124210999 ECH